Query= MSMg01no436_h09.b1 MSMg01no436_h09.b1 CHROMAT_FILE:
MSMg01no436_h09.b1 PHD_FILE: MSMg01no436_h09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:01:32 2005
(569 letters)
>mm_chr2_3156431_3157399
Length = 969
Score = 1077 bits (557), Expect = 0.0
Identities = 566/569 (99%)
Strand = Plus / Plus
Query: 1 tttctggtgtatgaagtcaccacatcctgtgaaattactcacaagtacccttattccttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttctggtgtatgaagtcaccacatcctgtgaaattactcacaagtacccttattccttt 260
Query: 61 atctgcttccgttagcacagtcacctaatggtttcagcatggatacaatcacatcgccaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atctgcttccgttagcacagtcacctaatggtttcagcatggatacaatcacatcgccaa 320
Query: 121 gcattcattattactcatactcttagcacgctgataagcaagatggtaacagggtgttat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcattcattattactcatactcttagcacgctgataagcaagatggtaacagggtgttat 380
Query: 181 tccacagtgggtccaagtattgtaagttgcaatatagagttttttaagttgcataagatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tccacagtgggtccaagtattgtaagttgcaatatagagttttttaagttgcataagatg 440
Query: 241 ggtctgatcagaactatctgtcagtaaaattccctattcctattccctcgtttctaggtt 300
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggtctgatcagaacaatctgtcagtaaaattccctattcctattccctcgtttctaggtt 500
Query: 301 ggagcttcacactggcccttgtaactagctactactgctccaacttgtgcctctgagggg 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggagcttcacactggcccttgtaactagctactactgctccaacttgtgcctctgaggga 560
Query: 361 cgtattggaaccattttacaaatgaagctgctgaaacacaaagcaagctagctccttccc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cgtattggaaccattttacaaatgaagctgctgaaacacaaagcaagctagctccttccc 620
Query: 421 gtaccttcttcccataccaaggaggtttatctatctgtcttggttctgctaatgagatgg 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gtaccttcttcccataccaaggaggtttatctatctgtcttggttctgctaatgagatga 680
Query: 481 ggttcaagagggatggcagttcctgggaagtccagtgtagtgaatgaccagtgtgtacaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ggttcaagagggatggcagttcctgggaagtccagtgtagtgaatgaccagtgtgtacaa 740
Query: 541 agaccagcaaatgaagctgagtcctccag 569
|||||||||||||||||||||||||||||
Sbjct: 741 agaccagcaaatgaagctgagtcctccag 769
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 569
Length of database: 969
Length adjustment: 10
Effective length of query: 559
Effective length of database: 959
Effective search space: 536081
Effective search space used: 536081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no436_h09.g1 MSMg01no436_h09.g1 CHROMAT_FILE:
MSMg01no436_h09.g1 PHD_FILE: MSMg01no436_h09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:01:32 2005
(541 letters)
>mm_chr2_3325882_3326822
Length = 941
Score = 1025 bits (530), Expect = 0.0
Identities = 538/541 (99%)
Strand = Plus / Minus
Query: 1 atcggtcctctcctcctcccggtgcaggtcgaccgatggccagagacagggtacgtgaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 atcggtcctctcctcctcccggtgcaggtcgaccgatggccagagacagggtacgtgaag 682
Query: 61 aaacttcagcggagggacaatactttcttctactacaacaaagagagggagtgcgaggac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aaacttcagcggagggacaatactttcttctactacaacaaagagagggagtgcgaggac 622
Query: 121 aaggaggtccacaaagtgaaggtttacgtctactgaccttttcctttcttcggcttggca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aaggaggtccacaaagtgaaggtttacgtctactgaccttttcctttcttcggcttggca 562
Query: 181 atgctcctttaagaattggttgtttacattcttccatcgtgtaaatgtcattttacaaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atgctcctttaagaattggttgtttacattcttccatcgtgtaaatgtcattttacaaaa 502
Query: 241 caattcacaattctgtctttaattcatggtgtcttacacaacataaacacccaccttgaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 caattcacaattctgtctttaattcatggtgtcttacacaacataaacacccaccttgaa 442
Query: 301 accttgaattgtccagttatcttgtctagttgtgaaatgcaattactgagaaccttagaa 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 441 accttgaattgtccagttatcttgtctagttgtgaaatgcaattactgagaaccttagga 382
Query: 361 tctggccctcccctccacctcctgcggagcacattggtgactctcttgggaaaccagccg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tctggccctcccctccacctcctgcggagcacattggtgactctcttgggaaaccagccg 322
Query: 421 cttagaagcagcttggaattaggacggtatttccttagagcacatttgtgctccaggcag 480
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 321 cttagaagcagcttggaattaggactgtatttccttagagcacatttgtgctccaggcag 262
Query: 481 cacccccctcctggcatttccctgcctacaacagtacttgcattttttggnctggtggtt 540
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 261 cacccccctcctggcatttccctgcctacaacagtacttgcattttttggcctggtggtt 202
Query: 541 t 541
|
Sbjct: 201 t 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 541
Length of database: 941
Length adjustment: 10
Effective length of query: 531
Effective length of database: 931
Effective search space: 494361
Effective search space used: 494361
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
