Query= MSMg01no436_h13.b1 MSMg01no436_h13.b1 CHROMAT_FILE:
MSMg01no436_h13.b1 PHD_FILE: MSMg01no436_h13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:01:33 2005
(426 letters)
>mm_chr2_56078050_56078875
Length = 826
Score = 325 bits (168), Expect = 3e-93
Identities = 177/180 (98%)
Strand = Plus / Minus
Query: 247 tctatctatctatctatctatctatctatctatctatctatctacctatctatctatcta 306
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 698 tctatctatctatctatctatctatctatctatctatctatctatctatctatctatcta 639
Query: 307 tctatctatctattttctttgaaggacagctgcttgcttcatggtgagctttactgtcta 366
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 638 tctatctatctattttctttgaaggacagctgcttgcttcatggtgagctttagtgtcta 579
Query: 367 ttgaactctccagcctttctgtattggactgaaacttggtttgcaccccatcatttcatc 426
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 ttgaagtctccagcctttctgtattggactgaaacttggtttgcaccccatcatttcatc 519
Score = 199 bits (103), Expect = 2e-55
Identities = 115/119 (96%)
Strand = Plus / Minus
Query: 1 ttcctttccaaagaaagtgaatctttgttatcaaagtccctgcctttctttctttctttc 60
||||||||||||||||||||||||||||||||||| ||||||||||||| ||| ||| ||
Sbjct: 744 ttcctttccaaagaaagtgaatctttgttatcaaactccctgcctttctatctatctatc 685
Query: 61 tatctatctatctatctatctatctatctatctatctatctatctatctatctatctat 119
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 tatctatctatctatctatctatctatctatctatctatctatctatctatctatctat 626
Score = 93.5 bits (48), Expect = 2e-23
Identities = 48/48 (100%)
Strand = Plus / Minus
Query: 87 tctatctatctatctatctatctatctatctatctatctatctatcta 134
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 698 tctatctatctatctatctatctatctatctatctatctatctatcta 651
Score = 62.6 bits (32), Expect = 5e-14
Identities = 32/32 (100%)
Strand = Plus / Minus
Query: 188 ctatctatctatctatctatctatctatctat 219
||||||||||||||||||||||||||||||||
Sbjct: 657 ctatctatctatctatctatctatctatctat 626
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 146
Number of extensions: 63
Number of successful extensions: 62
Number of sequences better than 10.0: 1
Number of HSP's gapped: 56
Number of HSP's successfully gapped: 6
Length of query: 426
Length of database: 826
Length adjustment: 9
Effective length of query: 417
Effective length of database: 817
Effective search space: 340689
Effective search space used: 340689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no436_h13.g1 MSMg01no436_h13.g1 CHROMAT_FILE:
MSMg01no436_h13.g1 PHD_FILE: MSMg01no436_h13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:01:33 2005
(635 letters)
>mm_chr2_55999701_56000734
Length = 1034
Score = 1168 bits (604), Expect = 0.0
Identities = 628/637 (98%), Gaps = 5/637 (0%)
Strand = Plus / Plus
Query: 1 aaagaagacttgagagtggagagagggaccatttcagatgtgtgagcatttgtctttcca 60
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 201 aaagaagacttgagagtggagag--ggaccatttcagatgtgtgagcatttgtctttcca 258
Query: 61 tgtttgtaaacgtgatttaagtgtctgacatctaataaaaaatctctttaaatgtagtag 120
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 259 tgtttgtaaacgtgatttaagtgcctgacatctaataaaaaatctctttaaatgtagtag 318
Query: 121 aattttgtttcccttgaaacgtagcatctctgtttcaaagtgtttggggctgagccatca 180
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 aattttgtttccattgaaacgtagcatctctgtttcaaagtgtttggggctgagccatca 378
Query: 181 taatcttaaacacaaagcctgaaacctttgtacaatggcagtatgacggggactcacctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 taatcttaaacacaaagcctgaaacctttgtacaatggcagtatgacggggactcacctc 438
Query: 241 aaagagtctttccctttttactctgatgctgtcaataaaaacaaacaaagtgagctcttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 aaagagtctttccctttttactctgatgctgtcaataaaaacaaacaaagtgagctcttt 498
Query: 301 tccagtgacaattttgatatttctggcacaaatagccattttttt-cctgaagggggaaa 359
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 499 tccagtgacaattttgatatttctggcacaaatagccattttttttcctgaagggggaaa 558
Query: 360 agtcattaggaagacaatgttacttaaagtccattttgcattgagaatatttgacaccat 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 agtcattaggaagacaatgttacttaaagtccattttgcattgagaatatttgacaccat 618
Query: 420 tcaccggagataaacagatgtatgtgatttacatatgaaaacctatcagataatgtgaaa 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 tcaccggagataaacagatgtatgtgatttacatatgaaaacctatcagataatgtgaaa 678
Query: 480 atttgtgtgtgaactgcttcattcatggaattagcctatggtaatctctcattatataaa 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 atttgtgtgtgaactgcttcattcatggaattagcctatggtaatctctcattatataaa 738
Query: 540 agagaaaaacgattactaaaaaatctctaaatacatattaatgtgcttacattgtttaag 599
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 739 agagaaaaacgattactaaaaaatctctaaataaatattaatgtgcttacattgtttaag 798
Query: 600 ataaataanatatttagagagaancaatgaaa-gaag 635
|||||||| |||||||||||||| |||||||| ||||
Sbjct: 799 ataaataaaatatttagagagaa-caatgaaaagaag 834
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 635
Length of database: 1034
Length adjustment: 10
Effective length of query: 625
Effective length of database: 1024
Effective search space: 640000
Effective search space used: 640000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
