Query= MSMg01no436_j22.b1 MSMg01no436_j22.b1 CHROMAT_FILE:
MSMg01no436_j22.b1 PHD_FILE: MSMg01no436_j22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:01:45 2005
(250 letters)
>mm_chr2_77357131_77357780
Length = 650
Score = 468 bits (242), Expect = e-136
Identities = 248/250 (99%)
Strand = Plus / Minus
Query: 1 ttgaaatgatggaagaatttatctctcagtgtaatgccgcgcaccgggcgtgagcgaagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 ttgaaatgatggaagaatttatctctcagtgtaatgccgcgcaccgggcgtgagcgaagg 391
Query: 61 cgtgagcgagcgaagactgtaatctttaaagtgaaggtaagcctcgctggctgttcagca 120
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 cgtgagcgagcgaggactgtaatctttaaagtgaaggtaagcctcgctggctgttcagca 331
Query: 121 ttcacactgcagataacttctctgacagaagaagagtgtgacagaaatataaaattgttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 ttcacactgcagataacttctctgacagaagaagagtgtgacagaaatataaaattgttc 271
Query: 181 ataagctgcaggaaaagggcaaacatcagaatcagggtgggagaaaaataacgcttgcta 240
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 aaaagctgcaggaaaagggcaaacatcagaatcagggtgggagaaaaataacgcttgcta 211
Query: 241 attttcagac 250
||||||||||
Sbjct: 210 attttcagac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 250
Length of database: 650
Length adjustment: 9
Effective length of query: 241
Effective length of database: 641
Effective search space: 154481
Effective search space used: 154481
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no436_j22.g1 MSMg01no436_j22.g1 CHROMAT_FILE:
MSMg01no436_j22.g1 PHD_FILE: MSMg01no436_j22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:01:45 2005
(528 letters)
>mm_chr2_77172623_77173551
Length = 929
Score = 1000 bits (517), Expect = 0.0
Identities = 526/529 (99%), Gaps = 1/529 (0%)
Strand = Plus / Plus
Query: 1 cttcatttgtatccagaagggcgtctaccacacaccctcttcagtgagcaggataaacat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttcatttgtatccagaagggcgtctaccacacaccctcttcagtgagcaggataaacat 260
Query: 61 ctatcctgttctaagcagatctccccgctcagagtctgtacatctggaaaacgttgctg- 119
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctatcctgttctaagcagatctccccgctcagagtctgtacatctggaaaacgttgctgc 320
Query: 120 tctaaagcatggttccaactgtgagccgctggcaggagctcccgctactcagacttttgg 179
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctaaagcgtggttccaactgtgagccgctggcaggagctcccgctactcagacttttgg 380
Query: 180 tatttattgggagatcctgcataaatggcacaaggatgcctggagggaggcctggaaaac 239
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 381 tatttattgggagatcctgcataaatggcacaaggatgcccggagggaggcctggaaaac 440
Query: 240 cctccggagctccacagctgggctccctctctcagctgccaggctggcatcgtgtttggg 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cctccggagctccacagctgggctccctctctcagctgccaggctggcatcgtgtttggg 500
Query: 300 cagtgagctttagattctgacagagatgaaaggctaaggaccaaacctctgttacggaaa 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cagtgagctttagattctgacagagatgaaaggctaaggaccaaacctctgttacggaaa 560
Query: 360 gacttccagattcttcttccagtctccagcttccttgttgatgagaattcatgaattggt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gacttccagattcttcttccagtctccagcttccttgttgatgagaattcatgaattggt 620
Query: 420 tatatcttcaaaactttcaaagtgagttcagatcaatattgttgagccttaagtatggcg 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tatatcttcaaaactttcaaagtgagttcagatcaatattgttgagccttaagtatggcg 680
Query: 480 agttacatttaaaagcattgtcctgaggactcggcaagaacgttgaccc 528
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 agttacatttaaaagcattgtcctgaggactcggcaagaacgttgaccc 729
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 528
Length of database: 929
Length adjustment: 10
Effective length of query: 518
Effective length of database: 919
Effective search space: 476042
Effective search space used: 476042
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
