Query= MSMg01no436_k01.b1 MSMg01no436_k01.b1 CHROMAT_FILE:
MSMg01no436_k01.b1 PHD_FILE: MSMg01no436_k01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:01:45 2005
(417 letters)
>mm_chr2_43290291_43291107
Length = 817
Score = 775 bits (401), Expect = 0.0
Identities = 413/417 (99%)
Strand = Plus / Minus
Query: 1 tgcatgttcagcaaactgaagttagaaaggaaacattttatgtcaaagaatatataggca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 tgcatgttcagcaaactgaagttagaaaggaaacattttatgtcaaagaatatataggca 558
Query: 61 ctgacagtacaacgaaaaactgttttcacaacctgctttcattacagacacagcagttgt 120
|||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 557 ctgacagttcaacgaaaaactgttttcacaacctgcttccattacagacacagcagttgt 498
Query: 121 ctcaccaggctcatgatcgtctagggactatggtcgtcatggggagcatcttgtaacctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 ctcaccaggctcatgatcgtctagggactatggtcgtcatggggagcatcttgtaacctg 438
Query: 181 tgttggtacttgaattgggttatccacaattcttcttctaactatgcagttggtgttcag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 tgttggtacttgaattgggttatccacaattcttcttctaactatgcagttggtgttcag 378
Query: 241 ttcctttacctgcatgtacttactatattagcacgcactatataagctccttgctcagta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 ttcctttacctgcatgtacttactatattagcacgcactatataagctccttgctcagta 318
Query: 301 atgcatccaaaagccatggatctatacctacatctttctcagaacaatgacctaattttc 360
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 317 atgcatccaaaagccatggatctatacctacatctttcttagaacaatgacctaattttc 258
Query: 361 ttcatttctaacaaaaatcaaactttgtttctactcaaacacattctaatatacaaa 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 atcatttctaacaaaaatcaaactttgtttctactcaaacacattctaatatacaaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 417
Length of database: 817
Length adjustment: 9
Effective length of query: 408
Effective length of database: 808
Effective search space: 329664
Effective search space used: 329664
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no436_k01.g1 MSMg01no436_k01.g1 CHROMAT_FILE:
MSMg01no436_k01.g1 PHD_FILE: MSMg01no436_k01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:01:45 2005
(425 letters)
>mm_chr2_43109329_43110153
Length = 825
Score = 733 bits (379), Expect = 0.0
Identities = 412/423 (97%), Gaps = 1/423 (0%)
Strand = Plus / Plus
Query: 1 tttcagatcccatagtaacttcataacaaccagagcgacctgaatctcaacactgattca 60
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 200 tttcagatcccatagtaactccataacaaccagagcgacctgaatctcaacactgattca 259
Query: 61 ccacaggttggagaaatattccttatgcttatttttgtgctttgagctgtggtttggatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 ccacaggttggagaaatattccttatgcttatttttgtgctttgagctgtggtttggatc 319
Query: 121 tctaatccatccatgcaggacctgctgatgctacttgggtttctatgagttcatatgagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tctaatccatccatgcaggacctgctgatgctacttgggtttctatgagttcatatgagc 379
Query: 181 aatttacgtgttgagttagaggaccttattttcctgatattctctgtcccttctggctct 240
| | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 actgtacatgttgagttagaggaccttattttcctgatattctctgtcccttctggctct 439
Query: 241 tatatttatcctctctgcctcctctccgcagggtttcttt-aaaaaggaaatcattattt 299
|| |||||||||||||||||||||||| |||||||| ||| |||||||||||||||||||
Sbjct: 440 tagatttatcctctctgcctcctctccacagggttttttttaaaaaggaaatcattattt 499
Query: 300 tgtgtaataattttataagttttagtgcttgataactgagccacattgtttttagtgaag 359
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 500 tgtgtaataattttataagttttagtgcttgataactgagctacattgtttttagtgaag 559
Query: 360 caataggctactgttgtatcacattcttagagtaagctactcacctctaaatgatagaaa 419
||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct: 560 caataggctactgttgtatcaaattcttagagtaagctattcacctctaaatgatagaaa 619
Query: 420 gta 422
|||
Sbjct: 620 gta 622
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 425
Length of database: 825
Length adjustment: 9
Effective length of query: 416
Effective length of database: 816
Effective search space: 339456
Effective search space used: 339456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
