Query= MSMg01no436_l22.b1 MSMg01no436_l22.b1 CHROMAT_FILE:
MSMg01no436_l22.b1 PHD_FILE: MSMg01no436_l22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:01:54 2005
(472 letters)
>mm_chr2_103658398_103659269
Length = 872
Score = 534 bits (276), Expect = e-156
Identities = 288/294 (97%), Gaps = 4/294 (1%)
Strand = Plus / Minus
Query: 1 tcatttatacattgtgtatatataaatacatgcattactgtctaaaaacaagaaaaaaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 tcatttatacattgtgtatatataaatacatgcattactgtctaaaaacaagaaaaaaca 241
Query: 61 tatacatgaataaataataaaagataagaattttaatgagggggctggtgagatggctca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 tatacatgaataaataataaaagataagaattttaatgagggggctggtgagatggctca 181
Query: 121 gtgggtaagagcacccgactgctcttccgaaggtccagagttcaaatcccagcaaccaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 gtgggtaagagcacccgactgctcttccgaaggtccagagttcaaatcccagcaaccaca 121
Query: 181 tggtggctcacaaccatccgtaaggagatctgactccctcttctggagtgtctgaagaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 tggtggctcacaaccatccgtaaggagatctgactccctcttctggagtgtctgaagaca 61
Query: 241 gctacagtgtatttacttataataaataaataaataaatcttaacaaaaaaaaa 294
||||||||||| |||| |||||||||||||||||| |||||||||||||||
Sbjct: 60 gctacagtgtacttacatataataaataaataaat----cttaacaaaaaaaaa 11
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 472
Length of database: 872
Length adjustment: 10
Effective length of query: 462
Effective length of database: 862
Effective search space: 398244
Effective search space used: 398244
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no436_l22.g1 MSMg01no436_l22.g1 CHROMAT_FILE:
MSMg01no436_l22.g1 PHD_FILE: MSMg01no436_l22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:01:54 2005
(400 letters)
>mm_chr2_103464996_103465796
Length = 801
Score = 743 bits (384), Expect = 0.0
Identities = 396/400 (99%), Gaps = 1/400 (0%)
Strand = Plus / Plus
Query: 1 ctggaagaaagggaggaatccctgcaagtctggcatcttgtgcacgtgtgacagcatcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctggaagaaagggaggaatccctgcaagtctggcatcttgtgcacgtgtgacagcatcaa 260
Query: 61 cggacaaggcagtaagcctttatctatcaattgtcaccagcttccctgtgacaaaaatgt 120
|| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 261 agggcaaggcagtaagcctttatctatcaattgtcaccagcttccctatgacaaaaatgt 320
Query: 121 gcagaatagctctgtaagctcagagcctggtgtggtcttttcataatgactgcccattcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcagaatagctctgtaagctcagagcctggtgtggtcttttcataatgactgcccattcc 380
Query: 181 tgcatcttcactagtaaaagacctgcagtataatggaaacgggg-aaaggaagagccacc 239
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 381 tgcatcttcactagtaaaagacctgcagtataatggaaacgggggaaaggaagagccacc 440
Query: 240 ttgcattcctgccagcaaggctacatgaccatgttgcactgtcacagaagcaaagcacac 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttgcattcctgccagcaaggctacatgaccatgttgcactgtcacagaagcaaagcacac 500
Query: 300 actgggtcctgctgcataatgatgaatccccagagtccccagatagtgatcgatagtgac 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 actgggtcctgctgcataatgatgaatccccagagtccccagatagtgatcgatagtgac 560
Query: 360 gcccagctcaggatctcgaataatgagctactcagtcctg 399
||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gcccagctcaggatctcgaataatgagctactcagtcctg 600
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 400
Length of database: 801
Length adjustment: 9
Effective length of query: 391
Effective length of database: 792
Effective search space: 309672
Effective search space used: 309672
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
