Query= MSMg01no437_b13.b1 MSMg01no437_b13.b1 CHROMAT_FILE:
MSMg01no437_b13.b1 PHD_FILE: MSMg01no437_b13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:02:21 2005
(637 letters)
>mm_chr2_83327899_83328934
Length = 1036
Score = 1180 bits (610), Expect = 0.0
Identities = 627/633 (99%), Gaps = 1/633 (0%)
Strand = Plus / Plus
Query: 5 gaattctatccctattacccacatagaaagccaacatgatagcacatacttgtattcaca 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctatccctagtacccacatagaaagccaacatgatagcacatacttgtattcaca 264
Query: 65 acactagggaggcagagataggtgaatgttgaggacttattagcccaccaccctagtcta 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 acactagggaggcagagataggtgaatgttgaggacttattagcccaccaccctagtcta 324
Query: 125 attggcaagccctgtctcaagaacatgacagacagcttctgcaaaatcgcacctgtggtt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 attggcaagccctgtctcaagaacatgacagacagcttctgcaaaatcgcacctgtggtt 384
Query: 185 gacctcatggccactctgtgcacaggagcacataaccataaaagaagtgcttcagaactt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gacctcatggccactctgtgcacaggagcacataaccataaaagaagtgcttcagaactt 444
Query: 245 gactctcacacacacagagcagctaatgtagagatcctaattcctttcctctagttatta 304
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gattctcacacacacagagcagctaatgtagagatcctaattcctttcctctagttatta 504
Query: 305 gcagaggtcttaagtattatagaagaaattgtccctcctccacagaaagtatcttggcaa 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gcagaggtcttaagtattatagaagaaattgtccctcctccacagaaagtatcttggcaa 564
Query: 365 aaattgtctgagtaatatgaaaaactaaatctcaggaaggaaaaaaaaagaggattaaga 424
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 565 aaattgtctgagtaatatgaaaaactaaatctcaggaaggaaaaaaaa-gaggattaaga 623
Query: 425 taagcgctgggttttcataacccaatcagaacagctgcgactagtgatcccctgttgata 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 taagcgctgggttttcataacccaatcagaacagctgcgactagtgatcccctgttgata 683
Query: 485 aatgataggaagcacaaatgttagcgaggagcctttcaagacactggcaccaacaactga 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 aatgataggaagcacaaatgttagcgaggagcctttcaagacactggcaccaacaactga 743
Query: 545 gttcattgaagaacattattcacctctgctcagtctatgaatgtactacctaanaataat 604
||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||
Sbjct: 744 attcattgaagaacattattcacctctgctcaatctatgaatgtactacctaaaaataat 803
Query: 605 gatggagatcaaaattttcaatctccctgacag 637
|||||||||||||||||||||||||||||||||
Sbjct: 804 gatggagatcaaaattttcaatctccctgacag 836
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 637
Length of database: 1036
Length adjustment: 10
Effective length of query: 627
Effective length of database: 1026
Effective search space: 643302
Effective search space used: 643302
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no437_b13.g1 MSMg01no437_b13.g1 CHROMAT_FILE:
MSMg01no437_b13.g1 PHD_FILE: MSMg01no437_b13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:02:21 2005
(597 letters)
>mm_chr2_83485673_83486669
Length = 997
Score = 1046 bits (541), Expect = 0.0
Identities = 549/552 (99%)
Strand = Plus / Minus
Query: 46 gaaatcttgttagagatgaaggaagacaaaatatattcatgatttttagggctaatagac 105
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 997 gaaatcttgttagagatgaaggaagacaaaatatattcatgatttttagggctaatagac 938
Query: 106 tattataaataactttaattttgctgttgtctttcgatcgagacagggtttctctgcgca 165
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 937 tattataaataactttaattttgctgttgtctttcgatcgagacagggtttctctgcgca 878
Query: 166 ggcccagactcctgaaacttactctgtagaccaggctactcttgaattcagagctctacc 225
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 877 ggcccagagtcctgaaacttactctgtagaccaggctactcttgaattcagagctctacc 818
Query: 226 tgcctctgcccttctgagtgtcatctccactgtcaggtgacaaaaattaacgaaacaaaa 285
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 817 tgcctctgcccttctgagtgtcatctccactgtcaggtgacaaaaattaacgaaacaaaa 758
Query: 286 aaccctttagtctcattaattaaaagtggttataggtccaagtggcctgaaatacattct 345
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 757 aaccctttagtctcattaattaaaagtggttataggtccaagtggcctgaaatacattct 698
Query: 346 ataatgttttgtaacatttatttttgaatggaaattttactgttttgtgatctattttat 405
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 697 ataatgttttgtaacatttatttttgaatggaaattttactgttttgtggtctattttat 638
Query: 406 atttattcaatctcagtagtttgtaagtaaaatgctatttctgaatgtcctttgttggca 465
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 atttattcaatctcagtagtttgtaagtaaaatgctatttctgaatgtcctttgttggca 578
Query: 466 caatattgaattgccaccagattattattcccagagatttaagtctcccaaatcctgatt 525
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 caatattgaattgccaccagattattattcccagagatttaagtctcccaaatcctgatt 518
Query: 526 tttttcttcagatgtaaaggngacaattatttttctttcttttattttcccttggacaag 585
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 517 tttttcttcagatgtaaaggtgacaattatttttctttcttttattttcccttggacaag 458
Query: 586 agtttctctgtg 597
||||||||||||
Sbjct: 457 agtttctctgtg 446
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 597
Length of database: 997
Length adjustment: 10
Effective length of query: 587
Effective length of database: 987
Effective search space: 579369
Effective search space used: 579369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
