Query= MSMg01no437_l22.b1 MSMg01no437_l22.b1 CHROMAT_FILE:
MSMg01no437_l22.b1 PHD_FILE: MSMg01no437_l22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:03:14 2005
(473 letters)
>mm_chr2_103237405_103238277
Length = 873
Score = 845 bits (437), Expect = 0.0
Identities = 461/469 (98%)
Strand = Plus / Minus
Query: 5 gaattctataagcataccttcccgtctataaactatcttttgcttcgatgcttagatatt 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 673 gaattctataagcagaccttcccgtctataaactatcttttgcttcgatgcttaggtatt 614
Query: 65 ttcctgatagcttctgataattgtttaacaataagcattgtataaaacccaggcaggtgg 124
||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 613 ttcctgataacttctgacaattgttcaacaataagcattgtataaaacccaggcaggtgg 554
Query: 125 tggctcagctcacagaatggcttcctctgttaggatttggttgcttatgattctttattg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 tggctcagctcacagaatggcttcctctgttaggatttggttgcttatgattctttattg 494
Query: 185 gtgctgatactataggcatttggataggactgtttttctcttcacaagactgtccattgt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 gtgctgatactataggcatttggataggactgtttttctcttcacaagactgtccattgt 434
Query: 245 atttccacgaaaagtcagcagctgcttccaatgaataccccaagtgtctctcccattgct 304
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 atttccaggaaaagtcagcagctgcttccaatgaataccccaagtgtctctcccattgct 374
Query: 305 ggaagtccattgtgaggctgtgccatctctagcccccagtgaaggtaacatagctttagt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 ggaagtccattgtgaggctgtgccatctctagcccccagtgaaggtaacatagctttagt 314
Query: 365 aggtctttgtcttatgtggtgttaaggagagcatgagactttactcaggaggctaaaagc 424
|||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 313 aggtctttgtcttatgtggtgttaaggagagcatgagactttccccaggaggctaaaagc 254
Query: 425 catgaactctgcaaaggcacatgctaaagaccttgttcttttgggtttc 473
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 catgaactctgcaaaggcacatgctaaagaccttgttcttttgggtttc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 473
Length of database: 873
Length adjustment: 10
Effective length of query: 463
Effective length of database: 863
Effective search space: 399569
Effective search space used: 399569
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no437_l22.g1 MSMg01no437_l22.g1 CHROMAT_FILE:
MSMg01no437_l22.g1 PHD_FILE: MSMg01no437_l22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:03:14 2005
(427 letters)
>mm_chr2_103073243_103074069
Length = 827
Score = 774 bits (400), Expect = 0.0
Identities = 421/428 (98%), Gaps = 1/428 (0%)
Strand = Plus / Plus
Query: 1 tcttattaatttctactgaaaaaaagtgtattgagattgtgactaggattgcattgaatg 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 201 tcttattaatttctactgaaaaaaagtgtattgagattgtgactaggattgcatcgaatg 260
Query: 61 tatacacggagtcaatgtgggaaggatgggacctaattaatattgagttttacacttaaa 120
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 261 tatacacggagtcaatgtgggaaggataggacctaattaatattgagttttacacttaaa 320
Query: 121 ttgtcttttgcttcttcagtgtcatagagttttcagggtgggggtcttatgtttttcact 180
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 321 ttgtcttttgcttcttcagtgtcatagagttttcagggtgggggtcttatgtctttcact 380
Query: 181 aaaatcaatactaagaatttcacattcattcctgctactgttaacaaaatcactttgaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaaatcaatactaagaatttcacattcattcctgctactgttaacaaaatcactttgaaa 440
Query: 241 atgtgcactggttggcttttgtcaactgtacccaggtt-agagtcatgtgagaaaggaca 299
|||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 441 atgtgcactggttggcttttgtcaactgtacccaggtttagagtcatgtgggaaaggaca 500
Query: 300 tcagctgaggtgctaactctgcccaactggccggtgacatggctgtgaggcactttctct 359
|||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 501 tcagctgaggcgctaactctgcccaactggccagtgacatggctgtgaggcactttctct 560
Query: 360 ggtatcacatttgcactttaggagttgatgggtggccagcttcatcttcatgaggaaccc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ggtatcacatttgcactttaggagttgatgggtggccagcttcatcttcatgaggaaccc 620
Query: 420 cagcagga 427
||||||||
Sbjct: 621 cagcagga 628
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 427
Length of database: 827
Length adjustment: 9
Effective length of query: 418
Effective length of database: 818
Effective search space: 341924
Effective search space used: 341924
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
