Query= MSMg01no437_n08.b1 MSMg01no437_n08.b1 CHROMAT_FILE:
MSMg01no437_n08.b1 PHD_FILE: MSMg01no437_n08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:03:21 2005
(451 letters)
>mm_chr2_127099551_127100402
Length = 852
Score = 843 bits (436), Expect = 0.0
Identities = 445/450 (98%), Gaps = 5/450 (1%)
Strand = Plus / Minus
Query: 5 gaattccaggacagccagagctacatagtgagactttgcctcagaataaagttaaataaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 754 gaattccaggacagccagagctacatagtgagactttgcctcagaataaagttaaataaa 695
Query: 65 atttaagaacaaaagcaaaagccaaacaaacaaacaaacaaaaataagattagagttttt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 694 atttaagaacaaaagcaaaagccaaacaaacaaacaaacaaaaataagattagagttttt 635
Query: 125 tcagctactactgatatgagacatatcttgaaataagacataaactagttcatggcattt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 tcagctactactgatatgagacatatcttgaaataagacataaactagttcatggcattt 575
Query: 185 ttggagcagttagttaatggtaaaataacaaaaacaaatccaacaaatctcaaggtccat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 ttggagcagttagttaatggtaaaataacaaaaacaaatccaacaaatctcaaggtccat 515
Query: 245 ttatgttgtttcgataatctaaggctttgtctgtaggagacaccaaactgactgtggcca 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 ttatgttgtttcgataatctaaggctttgtctgtaggagacaccaaactgactgtggcca 455
Query: 305 ttaagttcctttaagccagatagatttttcactagct---agtaatacactgaaaagttt 361
||||||||||||||||||||||||||||||||||||| | |||||||||||||||||
Sbjct: 454 ttaagttcctttaagccagatagatttttcactagctaaaa--aatacactgaaaagttt 397
Query: 362 aatgtattctaaatgcacccccccaaaaaaaaactgaaaaagggaaatggccaattttct 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 aatgtattctaaatgcacccccccaaaaaaaaactgaaaaagggaaatggccaattttct 337
Query: 422 ttgtgaaaatttactagaactaatttctca 451
||||||||||||||||||||||||||||||
Sbjct: 336 ttgtgaaaatttactagaactaatttctca 307
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 451
Length of database: 852
Length adjustment: 10
Effective length of query: 441
Effective length of database: 842
Effective search space: 371322
Effective search space used: 371322
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no437_n08.g1 MSMg01no437_n08.g1 CHROMAT_FILE:
MSMg01no437_n08.g1 PHD_FILE: MSMg01no437_n08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:03:22 2005
(292 letters)
>mm_chr2_126944154_126944845
Length = 692
Score = 530 bits (274), Expect = e-155
Identities = 286/290 (98%)
Strand = Plus / Plus
Query: 1 cagaacagccagggctacacagtaagagcctatctagaggaacaaacaagcaaacaaaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagaacagccagggctacacagtaagagcctatctagaggaacaaacaagcaaacaaaca 260
Query: 61 aaaggaaccaccaagtttctccttgttgagtggtcccagtggtagcccatctgagggaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaaggaaccaccaagtttctccttgttgagtggtcccagtggtagcccatctgagggaca 320
Query: 121 agaaaacaggtagaaaagtcaagggctgtttgtgtttttaggcaggtctctacatagctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agaaaacaggtagaaaagtcaagggctgtttgtgtttttaggcaggtctctacatagctc 380
Query: 181 tggagagcctgaaactcactacataccccagggaaacggcagtgctgggctgggtgtggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tggagagcctgaaactcactacataccccagggaaacggcagtgctgggctgggtgtggt 440
Query: 241 ggcatacatatttaggaggatgaggcaggaggatcttgagtttgaagtta 290
|||||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct: 441 ggcatacatagggaggagaatgaggcaggaggatcttgagtttgaagtta 490
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 692
Length adjustment: 9
Effective length of query: 283
Effective length of database: 683
Effective search space: 193289
Effective search space used: 193289
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
