Query= MSMg01no438_f20.b1 MSMg01no438_f20.b1 CHROMAT_FILE:
MSMg01no438_f20.b1 PHD_FILE: MSMg01no438_f20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:04:07 2005
(495 letters)
>mm_chr2_117017530_117018424
Length = 895
Score = 609 bits (315), Expect = e-178
Identities = 327/331 (98%)
Strand = Plus / Minus
Query: 165 tcctccattgttggtgggattgcaagcttgtacaaccactctggaaatcagtctggcagc 224
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 895 tcctccattgttggtgggattgcaagcttgtacaaccactctggaaatcagtctggcggc 836
Query: 225 tcctcggaaaattggacatagtactaccagaggatcctgcaatacctctcctgggcatat 284
||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||
Sbjct: 835 tcctcggaaaattggacatagaactaccggaggatcctgcaatacctctcctgggcatat 776
Query: 285 atccagaagatgttccaaccggtaagaaggacacatgttcatagcagccttgtttataat 344
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 atccagaagatgttccaaccggtaagaaggacacatgttcatagcagccttgtttataat 716
Query: 345 agccagaagctggaaagaactcttagtcctccttattgcaatagatggcacccaaaaacg 404
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 715 agccagaagctggaaagaactcttagtcctccttattgcaatagatggcacccaaaaaag 656
Query: 405 taagatccaatttctttatgatattatttttttctgggtccttgggttttatacagttca 464
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 taagatccaatttctttatgatattatttttttctgggtccttgggttttatacagttca 596
Query: 465 tctgtaatttgtcagctgaatttatctttgc 495
|||||||||||||||||||||||||||||||
Sbjct: 595 tctgtaatttgtcagctgaatttatctttgc 565
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 495
Length of database: 895
Length adjustment: 10
Effective length of query: 485
Effective length of database: 885
Effective search space: 429225
Effective search space used: 429225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no438_f20.g1 MSMg01no438_f20.g1 CHROMAT_FILE:
MSMg01no438_f20.g1 PHD_FILE: MSMg01no438_f20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:04:07 2005
(436 letters)
>mm_chr2_116845100_116845934
Length = 835
Score = 503 bits (260), Expect = e-146
Identities = 272/276 (98%), Gaps = 1/276 (0%)
Strand = Plus / Plus
Query: 1 tcctgccctgacttttgcctctgccctcctcaaaatgtatgttatgaagctacaggttta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcctgccctgacttttgcctctgccctcctcaaaatgtatgttatgaagctacaggttta 260
Query: 61 gccccctccccctggaccctcactcatgcccatattaaaggaagtacagaaaagttaagc 120
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 261 gccccctccccctggaccctcactcatgcccatgttaaaggaagtacagaaaagttaagc 320
Query: 121 aacctgcccaaggttacagtaattccagtactgcagttgcttgattaagagtgtaactag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aacctgcccaaggttacagtaattccagtactgcagttgcttgattaagagtgtaactag 380
Query: 181 gccattctcagctgcactctccaggcctcctttaatatatgctcatcattaggcagctga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gccattctcagctgcactctccaggcctcctttaatatatgctcatcattaggcagctga 440
Query: 241 aaaaaatgtttgttgttacttcaccctccacctccc 276
|||||||||||| ||||||||||||||| ||||||
Sbjct: 441 aaaaaatgtttggggttacttcaccctcc-cctccc 475
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 436
Length of database: 835
Length adjustment: 9
Effective length of query: 427
Effective length of database: 826
Effective search space: 352702
Effective search space used: 352702
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
