Query= MSMg01no438_i07.b1 MSMg01no438_i07.b1 CHROMAT_FILE:
MSMg01no438_i07.b1 PHD_FILE: MSMg01no438_i07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:04:19 2005
(259 letters)
>mm_chr2_171764451_171765109
Length = 659
Score = 478 bits (247), Expect = e-139
Identities = 256/259 (98%)
Strand = Plus / Plus
Query: 1 cacctttcgataaaaaaaaaaacaaaacatttataaaactgagagaagagagagcagtga 60
|||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 201 cacctttcaataaaaaaaaaaaaaaaacatttataaaactgagagaagagagagcagtga 260
Query: 61 gaagcaaaatatttattaacatggattagaaacctctggcacaggtacttaagaacctca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaagcaaaatatttattaacatggattagaaacctctggcacaggtacttaagaacctca 320
Query: 121 aagagcagtgaggagttgccatccagaaagcagcacaacagcatcttcaacagggaacca 180
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aagaacagtgaggagttgccatccagaaagcagcacaacagcatcttcaacagggaacca 380
Query: 181 gagtgagcgccaccaagaatagaaccacctgacacaatgtgcctcctgatgtgaggcaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gagtgagcgccaccaagaatagaaccacctgacacaatgtgcctcctgatgtgaggcaca 440
Query: 241 atatcacacttgtggtgct 259
|||||||||||||||||||
Sbjct: 441 atatcacacttgtggtgct 459
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 259
Length of database: 659
Length adjustment: 9
Effective length of query: 250
Effective length of database: 650
Effective search space: 162500
Effective search space used: 162500
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no438_i07.g1 MSMg01no438_i07.g1 CHROMAT_FILE:
MSMg01no438_i07.g1 PHD_FILE: MSMg01no438_i07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:04:20 2005
(225 letters)
>mm_chr2_171962259_171962884
Length = 626
Score = 408 bits (211), Expect = e-118
Identities = 222/229 (96%), Gaps = 7/229 (3%)
Strand = Plus / Minus
Query: 1 aagaaatgaacaagaaggaaataaaaagccacaggaaagtaaaaaatgccccagtggcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 aagaaatgaacaagaaggaaataaaaagccacaggaaagtaaaaaatgccccagtggcca 367
Query: 61 gaggttctgggcgtcctcagattttcatgagcagcctggtccttagcatgtagaataggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 gaggttctgggcgtcctcagattttcatgagcagcctggtccttagcatgtagaataggc 307
Query: 121 atggatgccctgagccactggcagggttcagagtcagggggtggggggaaggagctgtgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 atggatgccctgagccactggcagggttcagagtcagggggtggggggaaggagctgtgc 247
Query: 181 attttt----tggtctcagactgttggcattattggatctgaagaccag 225
| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 246 a---ttccagtggtctcagactgttggcattattggatctgaagaccag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 225
Length of database: 626
Length adjustment: 9
Effective length of query: 216
Effective length of database: 617
Effective search space: 133272
Effective search space used: 133272
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
