Query= MSMg01no438_i21.b1 MSMg01no438_i21.b1 CHROMAT_FILE:
MSMg01no438_i21.b1 PHD_FILE: MSMg01no438_i21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:04:22 2005
(586 letters)
>mm_chr2_3212716_3213701
Length = 986
Score = 1058 bits (547), Expect = 0.0
Identities = 576/591 (97%), Gaps = 10/591 (1%)
Strand = Plus / Minus
Query: 1 actcctgtttgaggcagatcaccacatccagaaattcaactgtggaaatcacgttgcctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 786 actcctgtttgaggcagatcaccacatccagaaattcaactgtggaaatcacgttgcctc 727
Query: 61 ttcataaaaccgtatccaactttaagagccccacgcccttcttcccgagattatgcatga 120
|| ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct: 726 tttataaaaccgtatccaactttaagagttccacgcccttcttcccgagattacgcatga 667
Query: 121 gagttccaaacaaattctgaagtttgctattttgagttggaaatgggactcagggccttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 gagttccaaacaaattctgaagtttgctattttgagttggaaatgggactcagggccttg 607
Query: 181 tttgaacaggccactggaaccagtccactccatttctgccatggaaagatcaaatattga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 tttgaacaggccactggaaccagtccactccatttctgccatggaaagatcaaatattga 547
Query: 241 acttgctaca-----aatttttattgtcagagtccatgaaatctataggcaggatttact 295
|||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct: 546 acttgctacaaaggcaa-----attgtcagagtccatgaaatctataggcaggatttact 492
Query: 296 agaagagcctcggaaatatttcagtgcgttctggagaatgcccacaaaagcctaccctgc 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 agaagagcctcggaaatatttcagtgcgttctggagaatgcccacaaaagcctaccctgc 432
Query: 356 ttctctctgatgtgctagctcccagcccctggcagtcagataggaccactgactgagaaa 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 ttctctctgatgtgctagctcccagcccctggcagtcagataggaccactgactgagaaa 372
Query: 416 agaggcaccagtggaaatgatgtctgccttttcttgttggccactgcatgtccatgttct 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 agaggcaccagtggaaatgatgtctgccttttcttgttggccactgcatgtccatgttct 312
Query: 476 ttctttcccagggctgaggagatgtaggattagaaaacagaagacagaaaagccacacat 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 ttctttcccagggctgaggagatgtaggattagaaaacagaagacagaaaagccacacat 252
Query: 536 tgggagatgcacagctcttatatggcagaagaaacaagagctcttctgaac 586
|||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 251 tgggagatgcacagctcttaaatggcagaagaaacaagagctcttctgaac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 586
Length of database: 986
Length adjustment: 10
Effective length of query: 576
Effective length of database: 976
Effective search space: 562176
Effective search space used: 562176
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no438_i21.g1 MSMg01no438_i21.g1 CHROMAT_FILE:
MSMg01no438_i21.g1 PHD_FILE: MSMg01no438_i21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:04:22 2005
(249 letters)
>mm_chr2_3067530_3068178
Length = 649
Score = 474 bits (245), Expect = e-138
Identities = 248/249 (99%)
Strand = Plus / Plus
Query: 1 caaactttctcaacagataaattagagggtcattagctgtaatggaaaatgattctttct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caaactttctcaacagataaattagagggtcattagctgtaatggaaaatgattctttct 260
Query: 61 tttgctgcacagttcatcactgatttcttaatcctgtgcatctgcagagtgtttacagtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttgctgcacagttcatcactgatttcttaatcctgtgcatctgcagagtgtttacagtg 320
Query: 121 gaccgggcatagatacatttcatctgtattaggctaaagccagaaatgtgatttaagagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaccgggcatagatacatttcatctgtattaggctaaagccagaaatgtgatttaagagc 380
Query: 181 agaatccaaattgatcgttattttaaaatgagcgtgggggctgggcatcacaatgcatgc 240
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 381 agaatccaaattgatcgttattttaaaatgagtgtgggggctgggcatcacaatgcatgc 440
Query: 241 ctgtagtcc 249
|||||||||
Sbjct: 441 ctgtagtcc 449
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 649
Length adjustment: 9
Effective length of query: 240
Effective length of database: 640
Effective search space: 153600
Effective search space used: 153600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
