CAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCAACACCGTTTAGAGACTCCGATTCAAAATGCTAACCCTCAGAAGGCA
GAGGCGGGCACGTTTCTTGGGAATTTGAGGCCAGCCTGGTCTACCTAGAG
AGTTCTAGGCCAGCTAAGGTTAGAGAGTGAGATCTCATCTTGAAAACAAA
ACAAATCAAAATAAAGCAAAGCAAAACATACCCAAAGTGTATCGGAGCTG
AGAAAGGACCCATAAAGTATGTATATGTGTATGTGTACATAGATATTAAA
TGTTTTTTCAAAGTTTTAAGAACAGCAGCTTTGGCTGAAGAGATGAGATG
GCTCACTGGTTAAGAGCACTTACTGTTGTTATAGCCATCTCGATTTGATT
TGGTTCCCAGAACCCACATGTTACCTCACAACCATCCTCCACGTATAACT
GCGACTCTTGAGACTCTCATACCCCTTTCAACACCAGGAACACGGGAAGC
ACACATCCACATATGCAGGATAGCACTTAGACCCATAAGATAAAAACACC
GTTTTATAAAGTGACAGCTACCTTTTCTTCTCACAATTCTTCCAAATTAG
TTTTGAAAGCTTAACAAAGATTATGTTAGAAAACTAGCTTTACTTTATTA
AACAATTTTTCATAAATTAAATGACCTGTTGGTTAATGGCACCGATAAAT
AGGTTATAGTACCCCTTATGTCTTTTTTATTATTATGTATT

GTAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXCTCCTGGAGAGAGCTGGTCTCCCAGGAGTACT
GGCACACAGGCTTGTAGGACAGGCAAGCCACAGAGACATCAAGACCAGCT
AACACCAGAGATAACCAAATGTCGAAAGGCAAGCACAAGAACATATGCAA
GAGAAACCAAGACTACGTGGCATCATCAGAACCCAGTTTTTCCACCACAG
TGAACCCTGGTTACCACAACACACCAGAAGAGCAAGAATCCGATTTAAAA
TCACATATCATGATGACGATAGAGGAATTTAAGAAGGACATAAATAACTC
CCTTAAAGAAATACAGGAGAACACAGGTAAATAGGTAGAAGACCTTAAAG
AGGAAACACAAAAATCCCTTAAAGAATTACAGGAAAACACAAACAAATAG
GTGAAGGAATTGAACAAAACCATCAAGGATCTAAAAAAGGGAATAGAAAC
AATAAAGAAGTCACAAAGGGAGACAACTCTGGAATTAGAAAACCTAGGAA
AGAGATCAGGAGTAATAGACACAAGCATTACCCACAGAATACCAGGGCTA
GAAGAGAGAAACTCAGGTGCAGAAGATACCTTAGAAAACATTTGACCACC
CCTCTTAGAATCCTACATATGCCAAAAGCTCCTAACCCCAAAATTCCAGG
AAAACCCCGGAACCTATGAGGAAGAAGCAAATTTTAGGGAAATAAGGTTT
TTGAAAACAATGGTTTAATN

Query= MSMg01no438_p02.b1 MSMg01no438_p02.b1 CHROMAT_FILE:
MSMg01no438_p02.b1 PHD_FILE: MSMg01no438_p02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:04:54 2005
         (460 letters)



>mm_chr2_78779412_78780271
          Length = 860

 Score =  731 bits (378), Expect = 0.0
 Identities = 426/442 (96%), Gaps = 7/442 (1%)
 Strand = Plus / Minus

                                                                       
Query: 21  agagactccgattcaaaatgctaaccctcagaaggcagaggcgggcacgtttcttgggaa 80
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 628 agagactccgattcaaaatgctaaccctcagaaggcagaggc-ggcacgtttcttgggaa 570

                                                                       
Query: 81  tttgaggccagcct-ggtctacctagagagttctaggccagc-taaggttagagagtgag 138
           ||||||||||| || ||||| ||||||| | ||||||||||| ||| |||||||||||||
Sbjct: 569 tttgaggccag-ctcggtctgcctagag-g-tctaggccagcttaa-gttagagagtgag 514

                                                                       
Query: 139 atctcatcttgaaaacaaaacaaatcaaaataaagcaaagcaaaacatacccaaagtgta 198
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 atctcatctcgaaaacaaaacaaatcaaaataaagcaaagcaaaacatacccaaagtgta 454

                                                                       
Query: 199 tcggagctgagaaaggacccataaagtatgtatatgtgtatgtgtacatagatattaaat 258
           | |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 453 tgggagctgagaaaggacccataaagtatgtatatgtgtatgtgtacatatatattaaat 394

                                                                       
Query: 259 gttttttcaaagttttaagaacagcagctttggctgaagagatgagatggctcactggtt 318
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 393 gttttttcaaagttttaagaacagcagctttggctgaagagatgagatggctcagtggtt 334

                                                                       
Query: 319 aagagcacttactgttgttatagccatctcgatttgatttggttcccagaacccacatgt 378
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 aaaagcacttactgttgttatagccatctcgatttgatttggttcccagaacccacatgt 274

                                                                       
Query: 379 tacctcacaaccatcctccacgtataactgcgactcttgagactctcatacccctttcaa 438
           |||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 273 tacctcacaaccatccaccacgtataactgcaactcttgagactctcatacccctttcaa 214

                                 
Query: 439 caccaggaacacgggaagcaca 460
           |||||||||||| |||||||||
Sbjct: 213 caccaggaacacaggaagcaca 192


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 460
Length of database: 860
Length adjustment: 10
Effective length of query: 450
Effective length of database: 850
Effective search space:   382500
Effective search space used:   382500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)