Query= MSMg01no439_c06.b1 MSMg01no439_c06.b1 CHROMAT_FILE:
MSMg01no439_c06.b1 PHD_FILE: MSMg01no439_c06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:05:10 2005
(338 letters)
>mm_chr2_102697746_102698483
Length = 738
Score = 600 bits (310), Expect = e-176
Identities = 331/342 (96%), Gaps = 8/342 (2%)
Strand = Plus / Minus
Query: 1 gagcaggttcatcttttggctgccctttttcttctatgacctggcctgtatgtgttgagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 gagcaggttcatcttttggctgccctttttcttctatgacctggcctgtatgtgttgagt 479
Query: 61 ggcctttagaaagaggggatgaacttggatcctctagtcactactcagagcatctctttc 120
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 478 ggcctttagaaagaggggatgaacttggatcttctagtcactactcagagcatctctttc 419
Query: 121 caggcttatccacaggcctctgttgatatttgtggactgttttaggagttaccatgttag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 caggcttatccacaggcctctgttgatatttgtggactgttttaggagttaccatgttag 359
Query: 181 atgtgctttcttggagaattgagatctttcctctcttttcttctcatttaacaatgagaa 240
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 358 atgtgctttcttggagaattgagatctttcctctcttttcttctcatttgacaatgagaa 299
Query: 241 gaatctctc----tttttattttggcccaagcggatgaacttagtactcattttgtagag 296
||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 gaatctctcacaat----attttggcccaagcggatgaacttagtactcattttgtagag 243
Query: 297 tccacacatctttgtggtgggctgccaagcaggaggtggggg 338
|||||||||||||||||||||||| |||||||||||||||||
Sbjct: 242 tccacacatctttgtggtgggctggcaagcaggaggtggggg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 338
Length of database: 738
Length adjustment: 9
Effective length of query: 329
Effective length of database: 729
Effective search space: 239841
Effective search space used: 239841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no439_c06.g1 MSMg01no439_c06.g1 CHROMAT_FILE:
MSMg01no439_c06.g1 PHD_FILE: MSMg01no439_c06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:05:10 2005
(242 letters)
>mm_chr2_102520139_102520780
Length = 642
Score = 460 bits (238), Expect = e-134
Identities = 241/242 (99%)
Strand = Plus / Plus
Query: 1 agttagctatttgaactttcaggtatttggtgtatttttaaggtacctctgcacatctgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agttagctatttgaactttcaggtatttggtgtatttttaaggtacctctgcacatctgc 260
Query: 61 atgttcaagttcaagcattcctctctgcatattcaccatccataggaccgagggtgtgga 120
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 261 atgttcaagttcaagcattcctctctgcatattcaccatccataggaacgagggtgtgga 320
Query: 121 tgctgaaagcaagcagcctgttcctgtgatgcctgcacagcacacagaggcttcggagac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgctgaaagcaagcagcctgttcctgtgatgcctgcacagcacacagaggcttcggagac 380
Query: 181 ctgaatgtgactttggtcactctatgtcagctgacattacatcagggacagggtatctat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctgaatgtgactttggtcactctatgtcagctgacattacatcagggacagggtatctat 440
Query: 241 aa 242
||
Sbjct: 441 aa 442
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 242
Length of database: 642
Length adjustment: 9
Effective length of query: 233
Effective length of database: 633
Effective search space: 147489
Effective search space used: 147489
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
