Query= MSMg01no439_e21.b1 MSMg01no439_e21.b1 CHROMAT_FILE:
MSMg01no439_e21.b1 PHD_FILE: MSMg01no439_e21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:05:23 2005
(404 letters)
>mm_chr2_34005881_34006685
Length = 805
Score = 737 bits (381), Expect = 0.0
Identities = 396/401 (98%), Gaps = 1/401 (0%)
Strand = Plus / Plus
Query: 5 gaattctctagattccca-tattcaggggtctttcaggagagtgactgcacttacttact 63
|||||||||||| || | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctctagaagccaaatattcaggggtctttcaggagagtgactgcacttacttact 264
Query: 64 aacctagaacattgtaaagactaacacctgccatttggccacatgcaggactgtcctacc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aacctagaacattgtaaagactaacacctgccatttggccacatgcaggactgtcctacc 324
Query: 124 acaaggtcacaccctgttgctgcagagcaacaataccaatggaaaaggagccccacctca 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 acaaggtcacaccctgttgctgcagagcaacaataccaatggaaaaggagccccacctca 384
Query: 184 agcctcaagtaggcaagctttcccaaggagaatgaccaggaggcacattccacagcccag 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 agcctcaagtaggcaagctttcccaaggagaatgaccaggaggcacattccacagcccag 444
Query: 244 cctagacatcgcccccaccccttccagctgactcaggactagtagcccacgaaacacctc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 cctagacatcgcccccaccccttccagctgactcaggactagtagcccacgaaacacctc 504
Query: 304 ctctgtgctggctcctgtcctgagttccttgggaaggtgaataatatactatgcccattt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ctctgtgctggctcctgtcctgagttccttgggaaggtgaataatatactatgcccattt 564
Query: 364 tacagaggaaactgcgactcaggaggtgtggcaccttgccc 404
|||||||||||||||||||||||||||| ||||||||||||
Sbjct: 565 tacagaggaaactgcgactcaggaggtgcggcaccttgccc 605
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 404
Length of database: 805
Length adjustment: 9
Effective length of query: 395
Effective length of database: 796
Effective search space: 314420
Effective search space used: 314420
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no439_e21.g1 MSMg01no439_e21.g1 CHROMAT_FILE:
MSMg01no439_e21.g1 PHD_FILE: MSMg01no439_e21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:05:23 2005
(422 letters)
>mm_chr2_34181236_34182057
Length = 822
Score = 642 bits (332), Expect = 0.0
Identities = 341/344 (99%), Gaps = 1/344 (0%)
Strand = Plus / Minus
Query: 1 ctggccacatatacaagaacgtactatagacagggaattcattcacgtcatatatcagta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 ctggccacatatacaagaacgtactatagacagggaattcattcacgtcatatatcagta 285
Query: 61 taagaacaaatctgtatgtatttgataaaattacttaaacttctattttaaaatagaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 taagaacaaatctgtatgtatttgataaaattacttaaacttctattttaaaatagaaaa 225
Query: 121 ctcctttttttttgttttttgtttttttg-tttttttggagacagggtttctctgtatag 179
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 224 ctcctttttttttgttttttgtttttttgttttttttggagacagggtttctctgtatag 165
Query: 180 ccctggctgtcctggaactcactctgtagaccaggctggcctcaaactcagaaatccgcc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 164 ccctggctgtcctggaactcactctgtagaccaggctggcctcaaactcagaaatccgcc 105
Query: 240 tgtctctgcctcccgattgctgggattaaaggcgtgtgccaccatgcccggcaaaactcc 299
|| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 104 tgcctctgcctcccgattgctgggattaaaggcgtgcgccaccatgcccggcaaaactcc 45
Query: 300 tattttttaattatagtttttcatgttcaatgctaactcataca 343
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44 tattttttaattatagtttttcatgttcaatgctaactcataca 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 422
Length of database: 822
Length adjustment: 9
Effective length of query: 413
Effective length of database: 813
Effective search space: 335769
Effective search space used: 335769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
