CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCCAGTGTTTGGCTACACACCATTTAATTCACCCCTTTCAGATGAGAA
AAGTGAGACATTACAGTGAATTTGCAATTCCTAGCCATCTACAATTGAAG
GACAAGATCCAGACTCAGATTATTATATAATTGTTGGCTGAGGAACTCAG
ACACTCATATAAGAAATTGGCCTACTGCATGCTTCTGGATGATTGCTTGG
AGTCCTCTGATTCTCCCTCTTTTATCCCAAGGTCAAAAATTAAAAAAAAA
AATCCAATAAAATCAAAAACTGCTGAAAGTCCTGACAGAACAGACAGTGA
GGAAGAAAACTGGCTCTTTAATTATGACGCGCCTTGAGCTGCTTTTACTC
CTTACAGATCTCTGAAGTTGAGCTGCCCCGTACTTTTGAATGCTCCCTGA
CAGGTCCCTATGATTTGTATCAGCTCGCGAAATTAAAAAAAAAAAAAAAA
AAGAATGCAGACTTGCAGCTCTCATTTGCCAGAATCTGTAAGATCTCTTT
TATCATGCCCCGTTACCTGGATTGGAAAGACTGTTCTCTTTATAGGCACC
TGCTCCAAACATTTTTTATTCCAGGGGCGAACAGGGTTTGGCAAACTTGA
AAAAAAGGTTTGNAGAAACCGGCCCTCCAAGGGTTAAACGGCCCCTCCCG
GGCGGTTTGGACCCTTTTTTTTTACCCCCTTTAAAAGGCTTTTTTTTTTC
TAGGGA

TGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXCTTGAGGGACAGCAGAAAGACTCAAAACAG
GCAACCTCAGGAGATAGATGGTGGGGGACCCTCTAGAATGTACCAGAGAT
CTGGGAGGTGAGAGACTTTCAGGACACAAAGGGAGGGACCATAGATGAAA
TACCCTACAGTAGGGAGAGGGCACTTGTAGAGTCTACTCCAGAAGATTGA
CAGGACATCAAGTGGAAGGATAGGGTTGCCATCCCACAGTCAAAAACTCT
GACTCAGAGTTGTCTAATGGTTCTGCAGGTACAAAGATGGAGAAAACCCG
AGGATATTGAGGTCCAGTGACAGGCCCAAACGGAGATCCAGATGGGGGAA
GCCCTAAGGCCTATTTCTCTGTTACTGAAGCTATGGTGTGCTTACAAACA
GAGGCCTATCATGACTGCCCACTGATAGGCCCCACTTGCAGCTGACAGAG
CCCCATGTCGATATTTATTTCCTCCCATTGTTATCATTCTGGCGACCCTT
GTGCTTGATTTCCCTTTTAGCTGGCTTTAACTGTACTTTTTCACCCCCCT
TTAGGACTTCCCCCTTTTTTCCGTTTCCCCTCTTTCCACCCCTTTTTTCT
TTTTTCCCTTTCCGAGCGCCTTTCCTTTCCTCCTCTTTTTCTCTCCTTTT
TTCTTTCTCTTACTCTCTCCCCTTTTCCTTTTTTTCCTTTA

Query= MSMg01no439_m22.b1 MSMg01no439_m22.b1 CHROMAT_FILE:
MSMg01no439_m22.b1 PHD_FILE: MSMg01no439_m22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:06:02 2005
         (453 letters)



>mm_chr2_138830243_138831096
          Length = 854

 Score =  824 bits (426), Expect = 0.0
 Identities = 444/450 (98%), Gaps = 1/450 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattccagtgtttggctacacaccatttaattcacccctttcagatgagaaaagtgaga 64
           |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccagtgtttggatacagaccatttaattcacccctttcagatgagaaaagtgaga 264

                                                                       
Query: 65  cattacagtgaatttgcaatt-cctagccatctacaattgaaggacaagatccagactca 123
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cattacagtgaatttgcaatttcctagccatctacaattgaaggacaagatccagactca 324

                                                                       
Query: 124 gattattatataattgttggctgaggaactcagacactcatataagaaattggcctactg 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gattattatataattgttggctgaggaactcagacactcatataagaaattggcctactg 384

                                                                       
Query: 184 catgcttctggatgattgcttggagtcctctgattctccctcttttatcccaaggtcaaa 243
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 385 catgcttctggatgattgcttggagtcttctgattctccctcttttatcccaaggtcaaa 444

                                                                       
Query: 244 aattaaaaaaaaaaatccaataaaatcaaaaactgctgaaagtcctgacagaacagacag 303
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aattaaaaataaaaatccaataaaatcaaaaactgctgaaagtcctgacagaacagacag 504

                                                                       
Query: 304 tgaggaagaaaactggctctttaattatgacgcgccttgagctgcttttactccttacag 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tgaggaagaaaactggctctttaattatgacgcgccttgagctgcttttactccttacag 564

                                                                       
Query: 364 atctctgaagttgagctgccccgtacttttgaatgctccctgacaggtccctatgatttg 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 atctctgaagttgagctgccccgtacttttgaatgctccctgacaggtccctatgatttg 624

                                         
Query: 424 tatcagctcgcgaaattaaaaaaaaaaaaa 453
           |||||||||| |||||||||||||||||||
Sbjct: 625 tatcagctcgtgaaattaaaaaaaaaaaaa 654


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 453
Length of database: 854
Length adjustment: 10
Effective length of query: 443
Effective length of database: 844
Effective search space:   373892
Effective search space used:   373892
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)