Query= MSMg01no440_a07.b1 MSMg01no440_a07.b1 CHROMAT_FILE:
MSMg01no440_a07.b1 PHD_FILE: MSMg01no440_a07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:06:17 2005
(203 letters)
>mm_chr2_128093105_128093707
Length = 603
Score = 311 bits (161), Expect = 1e-89
Identities = 194/215 (90%), Gaps = 16/215 (7%)
Strand = Plus / Plus
Query: 1 attctgggacatttcccccatgattcctatgtcttagttgaactttgtcataa------- 53
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 attctgggacatttcccccatgattcctatgtcttagttgaactttgtcataaaatatct 244
Query: 54 ---------gtgcatactctgtcctaaaacatacgcatgtttcttgggatgcgtgttggg 104
|||||| ||||||||||||||||||||||||||||||||||| ||| ||||
Sbjct: 245 ccacaaacggtgcatgctctgtcctaaaacatacgcatgtttcttgggatgagtgctggg 304
Query: 105 ggtcagcaaggtgtaacctcagaaggtgggctggagggaggtggagccaggggagaggta 164
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 gttcagcaaggtgtaacctcagaaggtgggctggagggaggtggagccaggggagaggta 364
Query: 165 gggagggttaggagccacgggggtgtggggaggtc 199
||||||||||||||||||| |||||||||||||||
Sbjct: 365 gggagggttaggagccacgtgggtgtggggaggtc 399
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 203
Length of database: 603
Length adjustment: 8
Effective length of query: 195
Effective length of database: 595
Effective search space: 116025
Effective search space used: 116025
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no440_a07.g1 MSMg01no440_a07.g1 CHROMAT_FILE:
MSMg01no440_a07.g1 PHD_FILE: MSMg01no440_a07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:06:17 2005
(450 letters)
>mm_chr2_128272542_128273391
Length = 850
Score = 265 bits (137), Expect = 4e-75
Identities = 140/141 (99%)
Strand = Plus / Minus
Query: 1 tctgtggacaagatggccctgtccaccctgcccatgggccaaacagggtaccttggcaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 tctgtggacaagatggccctgtccaccctgcccatgggccaaacagggtaccttggcaga 282
Query: 61 atatttaaagctgagatccaacctgtactcaattccagtatttacctgcatttgcaacca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 atatttaaagctgagatccaacctgtactcaattccagtatttacctgcatttgcaacca 222
Query: 121 tgacattgtgtaagaggagca 141
|||| ||||||||||||||||
Sbjct: 221 tgacgttgtgtaagaggagca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 450
Length of database: 850
Length adjustment: 10
Effective length of query: 440
Effective length of database: 840
Effective search space: 369600
Effective search space used: 369600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
