Query= MSMg01no440_b02.b1 MSMg01no440_b02.b1 CHROMAT_FILE:
MSMg01no440_b02.b1 PHD_FILE: MSMg01no440_b02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:06:22 2005
(406 letters)
>mm_chr2_130374050_130374855
Length = 806
Score = 756 bits (391), Expect = 0.0
Identities = 397/399 (99%)
Strand = Plus / Plus
Query: 4 ggaattcctaagtgagcgtaaccccagacatcagtgtcacaactgtaaggatctatatag 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcctaagtgagcgtaaccccagacatcagtgtcacaactgtaaggatctatatag 263
Query: 64 tgtctcttcatacatttcattagatcccagttctgtcacatggccgaatgtatttcatgc 123
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 264 tgtctcttcatacatttcattaaatcccagttctgtcacatggccgaatgtatttcatgc 323
Query: 124 ctcacacaccttacactcctccctgcgctagctttttcaccttcaaactcatcatatagc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ctcacacaccttacactcctccctgcgctagctttttcaccttcaaactcatcatatagc 383
Query: 184 attagtctacagcccgggttcagtcgggaccaaataaaactaccttaacccactgttccc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 attagtctacagcccgggttcagtcgggaccaaataaaactaccttaacccactgttccc 443
Query: 244 atcagccagccaaaagggctacatcctccttccccagcccagcttggagggccgtcttta 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 atcagccagccaaaagggctacatcctccttccccagcccagcttggagggccgtcttta 503
Query: 304 tcttctgcctcctcccctgtgagtaactgattttatgacctaaagctgctaggtgtgatc 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tcttctgcctcctcccctgtgagtaactgattttatgacctaaagctgctaggtgtgatc 563
Query: 364 ttaagtacctatttattagtttgatgggtgggtgggtgg 402
|| ||||||||||||||||||||||||||||||||||||
Sbjct: 564 ttcagtacctatttattagtttgatgggtgggtgggtgg 602
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 406
Length of database: 806
Length adjustment: 9
Effective length of query: 397
Effective length of database: 797
Effective search space: 316409
Effective search space used: 316409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no440_b02.g1 MSMg01no440_b02.g1 CHROMAT_FILE:
MSMg01no440_b02.g1 PHD_FILE: MSMg01no440_b02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:06:22 2005
(520 letters)
>mm_chr2_130550345_130551263
Length = 919
Score = 940 bits (486), Expect = 0.0
Identities = 501/506 (99%), Gaps = 1/506 (0%)
Strand = Plus / Minus
Query: 1 agtctgcttctgcctcctgactgctggcattaaaggtgttcaacactacttactgccaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 agtctgcttctgcctcctgactgctggcattaaaggtgttcaacactacttactgccaga 446
Query: 61 tgagatcctgtctttaaaaaaaagttttattattctgaaatcatttactgaaaaataagc 120
||||||||||||||| |||||||||||| |||||||||||| ||| ||||||||||||||
Sbjct: 445 tgagatcctgtcttt-aaaaaaagttttcttattctgaaattattcactgaaaaataagc 387
Query: 121 ctgtagtccgagaaagccactggtcttaatagaggacatctaagatttcacatcccatct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 ctgtagtccgagaaagccactggtcttaatagaggacatctaagatttcacatcccatct 327
Query: 181 gcagatgggaaatgaaagccgactagacagtgacaacttctgaggaagctgaggaagtat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 gcagatgggaaatgaaagccgactagacagtgacaacttctgaggaagctgaggaagtat 267
Query: 241 taacttggcaggtagcactcgctgaccaacctgggcttggtagctcacattgacagtcac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 taacttggcaggtagcactcgctgaccaacctgggcttggtagctcacattgacagtcac 207
Query: 301 aggcttgggagcctgaagcaggagaattgtcacaagctcaagggcaccttggctacaaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 aggcttgggagcctgaagcaggagaattgtcacaagctcaagggcaccttggctacaaag 147
Query: 361 taagatccatctcaaacaaacaaacttaaaaaatgtggagacctgtcttggccctgcctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 taagatccatctcaaacaaacaaacttaaaaaatgtggagacctgtcttggccctgcctt 87
Query: 421 cctgtcagtgttgaagccacgtcttgatgtttcccctccagcatcttcccactttccttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86 cctgtcagtgttgaagccacgtcttgatgtttcccctccagcatcttcccactttccttt 27
Query: 481 gtggagcataagcacagatggtcagg 506
|||||||||||||||||||| |||||
Sbjct: 26 gtggagcataagcacagatgatcagg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 520
Length of database: 919
Length adjustment: 10
Effective length of query: 510
Effective length of database: 909
Effective search space: 463590
Effective search space used: 463590
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
