Query= MSMg01no440_k07.b1 MSMg01no440_k07.b1 CHROMAT_FILE:
MSMg01no440_k07.b1 PHD_FILE: MSMg01no440_k07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:07:10 2005
(400 letters)
>mm_chr2_146444161_146444960
Length = 800
Score = 739 bits (382), Expect = 0.0
Identities = 394/398 (98%)
Strand = Plus / Minus
Query: 1 ggaattccacagaccatgccctaaaaatgttacaagcaatattgtgattcctaccccaac 60
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 ggaattccacagaccatgtgctaaaaatgttacaagcaatattgtgattcctaccccaac 507
Query: 61 ccccacaagaaaatcctacagatgaaaataactgcaattcaaaaagggtctaaggctggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 ccccacaagaaaatcctacagatgaaaataactgcaattcaaaaagggtctaaggctggc 447
Query: 121 ccaagaaggaaagtgttcgagtcctcgtatgagttcaaactatttaacaccaacaagagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 ccaagaaggaaagtgttcgagtcctcgtatgagttcaaactatttaacaccaacaagagg 387
Query: 181 catctgtgcacgaagagcaaatcatgaagttctagatagcaaagcaaacttctcagggtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 catctgtgcacgaagagcaaatcatgaagttctagatagcaaagcaaacttctcagggtt 327
Query: 241 tgatccatttagcggagacaagccaagtgtggttattatatgtgatgctatccatctaag 300
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 326 tgatccatttagcggagacaagccaagtgtggttattagatgtgatgctatccatctaag 267
Query: 301 caattcagagagtgccaatttgcttttataagtacacatatgtccacattttcatttata 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 caattcagagagtgccaatttgcttttataagtacacatatgtccacattttcatttata 207
Query: 361 tacacagtgtgtgcgtgtgtgtgtgtgtgtgtgtgtgt 398
||||||||||||| ||||||||||||||||||||||||
Sbjct: 206 tacacagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 169
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 400
Length of database: 800
Length adjustment: 9
Effective length of query: 391
Effective length of database: 791
Effective search space: 309281
Effective search space used: 309281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no440_k07.g1 MSMg01no440_k07.g1 CHROMAT_FILE:
MSMg01no440_k07.g1 PHD_FILE: MSMg01no440_k07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:07:10 2005
(464 letters)
>mm_chr2_146246111_146246975
Length = 865
Score = 859 bits (444), Expect = 0.0
Identities = 459/469 (97%), Gaps = 9/469 (1%)
Strand = Plus / Plus
Query: 1 aagggtggtgaaggcagcataagtctgcacagcttgggaaggacactcactgcctttggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aagggtggtgaaggcagcataagtctgcacagcttgggaaggacactcactgcctttggc 260
Query: 61 acatgcttctgagtactttccctgacggaaccagtgacagcgggaatactcaaggttgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acatgcttctgagtactttccctgacggaaccagtgacagcgggaatactcaaggttgaa 320
Query: 121 ctgagatgggaatcagtgggcctcctcagtactgcatggttttaggaatcaagtttctca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctgagatgggaatcagtgggcctcctcagtactgcatggttttaggaatcaagtttctca 380
Query: 181 gaaacagaacaaagggaaacaactagaataggtggtgcaaataactaaaaagataattac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaaacagaacaaagggaaacaactagaataggtggtgcaaataactaaaaagataattac 440
Query: 241 cagcaaatgcttttta-----taataaggaatgaggaacttacagttagagaacaacata 295
||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cagcaaatgct----aaggcataataaggaatgaggaacttacagttagagaacaacata 496
Query: 296 cttagacaaaaaatgccaacgggatgctaaactatctatattaggcttctagncagcaat 355
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 497 cttagacaaaaaatgccaacgggatgctaaactatctatattaggcttctagtcagcaat 556
Query: 356 gaaaatatgtgttatttatcaaacatttgttttatggtttgaggatcctgtttatgcttc 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 gaaaatatgtgttatttatcaaacatttgttttatggtttgaggatcctgtttatgcttc 616
Query: 416 tctgaagctgttgactatccactctaattgcatggttctgctgatgaaa 464
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 tctgaagctgttgactatccactctaattgcatggttctgctgatgaaa 665
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 464
Length of database: 865
Length adjustment: 10
Effective length of query: 454
Effective length of database: 855
Effective search space: 388170
Effective search space used: 388170
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
