Query= MSMg01no440_o05.b1 MSMg01no440_o05.b1 CHROMAT_FILE:
MSMg01no440_o05.b1 PHD_FILE: MSMg01no440_o05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:07:29 2005
(412 letters)
>mm_chr2_118573085_118573895
Length = 811
Score = 739 bits (382), Expect = 0.0
Identities = 403/412 (97%), Gaps = 5/412 (1%)
Strand = Plus / Plus
Query: 2 gaattcctttaggtatccg--caagcctttttaagtacagtgattggcaagtgttttctc 59
||||||||||||| | | |||||||||||||||||||||||||||||||||||||||
Sbjct: 202 gaattcctttaggaa---gagcaagcctttttaagtacagtgattggcaagtgttttctc 258
Query: 60 tcattccttttccggctcctcaactatcttaccggttccagatcttgtcttatttcattt 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 tcattccttttccggctcctcaactatcttaccggttccagatcttgtcttatttcattt 318
Query: 120 cttgcccttctagatcttgtcttactcgtgtttgcatttcctagtttttgagcctaacac 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 cttgcccttctagatcttgtcttactcgtgtttgcatttcctagtttttgagcctaacac 378
Query: 180 agcagcttgccgttagaaccaaatcagttgcaaaaccagagctttgatgtggttctgagt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 agcagcttgccgttagaaccaaatcagttgcaaaaccagagctttgatgtggttctgagt 438
Query: 240 tgctttatagggtgagaaagagcagaaggtagaattcttgttcaggagtgtgcctggcta 299
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 439 tgctttatagggtgagaaagagcagaaggtagaattcaagttcaggagtgtgcctggcta 498
Query: 300 gccagtgaagagaccagctcttggaagattgaactggcagctcatctttctcattcctta 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 gccagtgaagagaccagctcttggaagattgaactggcagctcatctttctcattcctta 558
Query: 360 taagcttccacttaaatgcagtcaacgattttctagaggtggtctcacacac 411
||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 559 taagcttccacttaaatgcagccaacgattttctagaggtggtctcacacac 610
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 412
Length of database: 811
Length adjustment: 9
Effective length of query: 403
Effective length of database: 802
Effective search space: 323206
Effective search space used: 323206
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no440_o05.g1 MSMg01no440_o05.g1 CHROMAT_FILE:
MSMg01no440_o05.g1 PHD_FILE: MSMg01no440_o05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:07:29 2005
(161 letters)
>mm_chr2_118710831_118711391
Length = 561
Score = 308 bits (159), Expect = 1e-88
Identities = 159/159 (100%)
Strand = Plus / Minus
Query: 1 tagaacagcagaagctgtggcctggagctgtcccttgttggaggaaacaggtggcaggca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 tagaacagcagaagctgtggcctggagctgtcccttgttggaggaaacaggtggcaggca 300
Query: 61 tgaagaagagaatgcccaccttgcccttgaacgtgtcgtgcgcccttggatgttcatgtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 tgaagaagagaatgcccaccttgcccttgaacgtgtcgtgcgcccttggatgttcatgtg 240
Query: 121 ccaaggtgggaggaaggggagtgggctgtgggtgaggtg 159
|||||||||||||||||||||||||||||||||||||||
Sbjct: 239 ccaaggtgggaggaaggggagtgggctgtgggtgaggtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 161
Length of database: 561
Length adjustment: 8
Effective length of query: 153
Effective length of database: 553
Effective search space: 84609
Effective search space used: 84609
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
