Query= MSMg01no440_o15.b1 MSMg01no440_o15.b1 CHROMAT_FILE:
MSMg01no440_o15.b1 PHD_FILE: MSMg01no440_o15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:07:31 2005
(439 letters)
>mm_chr2_144561834_144562672
Length = 839
Score = 768 bits (397), Expect = 0.0
Identities = 424/433 (97%)
Strand = Plus / Plus
Query: 7 ggaattcttttatgtttcatttattcttttgctttctaaccgtagaggtgggtatactag 66
|||||||||||||| | |||||||||||||||||||||| |||||||||||||||||||
Sbjct: 207 ggaattcttttatgggtaatttattcttttgctttctaactgtagaggtgggtatactag 266
Query: 67 tttctgagtgcttacatgttctggagtcaccacagttgacagagtgtttgggtcatcatc 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 tttctgagtgcttacatgttctggagtcaccacagttgacagagtgtttgggtcatcatc 326
Query: 127 ttttatgtgtagagcctgggacattgccgtggtggttggttggtcttgttccatgcttct 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 ttttatgtgtagagcctgggacattgccgtggtggttggttggtcttgttccatgcttct 386
Query: 187 tttcatttaggtacttgtctgccccatgcggtcattctgtcatcttttcggcacagttga 246
||||||||||| ||||||||||||||| | |||||||||||||||||||| |||||||||
Sbjct: 387 tttcatttaggcacttgtctgccccattccgtcattctgtcatcttttcgacacagttga 446
Query: 247 tcaggggcttactatgtcagggtgggacgggtgactgtcgctggtgtggtagggaagaga 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 tcaggggcttactatgtcagggtgggacgggtgactgtcgctggtgtggtagggaagaga 506
Query: 307 cttccctcactgtgtctattagcttctcctctgtgtgtacttgagccacgggagggcctt 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 cttccctcactgtgtctattagcttctcctctgtgtgtacttgagccacgggagggcctt 566
Query: 367 cagtgatgtcattgtttatgcttttgctgcacctacccagatctttctccctacaactcc 426
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 cagtgatgtcattatttatgcttttgctgcacctacccagatctttctccctacaactcc 626
Query: 427 caccctacagata 439
|||||||||||||
Sbjct: 627 caccctacagata 639
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 439
Length of database: 839
Length adjustment: 9
Effective length of query: 430
Effective length of database: 830
Effective search space: 356900
Effective search space used: 356900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no440_o15.g1 MSMg01no440_o15.g1 CHROMAT_FILE:
MSMg01no440_o15.g1 PHD_FILE: MSMg01no440_o15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:07:31 2005
(483 letters)
>mm_chr2_144712350_144713232
Length = 883
Score = 632 bits (327), Expect = 0.0
Identities = 346/355 (97%), Gaps = 6/355 (1%)
Strand = Plus / Minus
Query: 132 accactgatgcctttctccctagcagcctacatagcaccttgcagaacaatgaaaatgag 191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 883 accactgatgcctttctccctagcagcctacatagcaccttgcagaacaatgaaaatgag 824
Query: 192 gcatcagtggagtttcaacttgatttctctacagcttacaaagcctgtattattttgggg 251
|||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 823 gcattggtggagtttcaacttgatttctctacagcttacaaagcctctattattttgggg 764
Query: 252 tcccctggggctttccagaatgaagaaatatcccaaacctggcattaggatttttgttaa 311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 763 tcccctggggctttccagaatgaagaaatatcccaaacctggcattaggatttttgttaa 704
Query: 312 ataatcc---ttgggttttaagaagttcacccagctatgctaacttctaactctcgtttt 368
||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 703 ataatcctaatt---ttttaagaagttcacccagctatgctaacttctaactctcgtttt 647
Query: 369 tttaattggtttacgaagcattaaatttcccatatgggttttaaatacaatgcttccccg 428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 tttaattggtttacgaagcattaaatttcccatatgggttttaaatacaatgcttccccg 587
Query: 429 atgtttccacatctcccccattctcctatccccatccctaatgaaacattactct 483
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 atgtttccacatctcccccattctcctatccccatccctaatgaaacattactct 532
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 483
Length of database: 883
Length adjustment: 10
Effective length of query: 473
Effective length of database: 873
Effective search space: 412929
Effective search space used: 412929
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
