Query= MSMg01no441_c10.b1 MSMg01no441_c10.b1 CHROMAT_FILE:
MSMg01no441_c10.b1 PHD_FILE: MSMg01no441_c10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:07:50 2005
(470 letters)
>mm_chr2_78427734_78428603
Length = 870
Score = 893 bits (462), Expect = 0.0
Identities = 468/470 (99%)
Strand = Plus / Minus
Query: 1 acagaataccagaacaggatttgtggaaagagacattcacaagcaagcaatgaacaccca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 acagaataccagaacaggatttgtggaaagagacattcacaagcaagcaatgaacaccca 611
Query: 61 aagaagcagatggtcattatatatttaactggactcttgcccaccccactcccaccccca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 aagaagcagatggtcattatatatttaactggactcttgcccaccccactcccaccccca 551
Query: 121 atctagaaagagctctggtaatctggatccaagcaaggctctatccccgaaaccctgaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 atctagaaagagctctggtaatctggatccaagcaaggctctatccccgaaaccctgaca 491
Query: 181 cagactctcaataactgtagcaaaaacaggaacagactccaagtgatgtgttttgcttca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 cagactctcaataactgtagcaaaaacaggaacagactccaagtgatgtgttttgcttca 431
Query: 241 ataaaataggttctgggtcatccactttcttgtgttctgagaagaattaaactgaggtgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 ataaaataggttctgggtcatccactttcttgtgttctgagaagaattaaactgaggtgg 371
Query: 301 cttcatctccacatatcttacagataagtggtctacttagactcatctgaagccacgaga 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 tttcatctccacatatcttacagataagtggtctacttagactcatctgaagccacgaga 311
Query: 361 acctcttcttgagatagaggtagaaatcatgaactttccagggaaggacgtggctttctg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 310 acctcttcttgagatagaggtagaaatcatgaactttccagggaaggacgtggttttctg 251
Query: 421 ccttttcttctctaccactgctccatcacgctgtttgtggatgatctcag 470
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 ccttttcttctctaccactgctccatcacgctgtttgtggatgatctcag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 470
Length of database: 870
Length adjustment: 10
Effective length of query: 460
Effective length of database: 860
Effective search space: 395600
Effective search space used: 395600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no441_c10.g1 MSMg01no441_c10.g1 CHROMAT_FILE:
MSMg01no441_c10.g1 PHD_FILE: MSMg01no441_c10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:07:50 2005
(271 letters)
>mm_chr2_78262576_78263251
Length = 676
Score = 420 bits (217), Expect = e-122
Identities = 261/277 (94%), Gaps = 7/277 (2%)
Strand = Plus / Plus
Query: 1 agaggacctctcttgagtttactttgctaggaaggtggactgattgttttacc-ttgaga 59
|||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 201 agaggacctctcttgagtttactttgctaggaaggtggcctgattgttttacctttgaga 260
Query: 60 atgctgtgagatcaaatgaatgtgtgtttagcacagaacctaaaagggggcgtaacctgc 119
|||||||||||||||||||| ||||||||||||||||||| |||||||||||| ||||||
Sbjct: 261 atgctgtgagatcaaatgaaggtgtgtttagcacagaaccgaaaagggggcgttacctgc 320
Query: 120 gttttgttgttaattcctcaacaaggattgcttct---acagttctgctcttccttcttt 176
|||||||||||||||||||||||||||||||||| ||||||||| |||||| |||||
Sbjct: 321 tttttgttgttaattcctcaacaaggattgcttctcctacagttctgttcttccctcttt 380
Query: 177 tactctcctcccccttaaaacagtctgttttt-ctcagacctaacac-gagagttcagaa 234
|| ||||||||| ||||||||||||||||||| |||||||||||| | ||||||||||||
Sbjct: 381 tattctcctccctcttaaaacagtctgttttttctcagacctaac-cagagagttcagaa 439
Query: 235 agctgcccctgatgctaaccttgggtcaccatttgtc 271
|||||||||||||||||||||||||||||||||||||
Sbjct: 440 agctgcccctgatgctaaccttgggtcaccatttgtc 476
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 271
Length of database: 676
Length adjustment: 9
Effective length of query: 262
Effective length of database: 667
Effective search space: 174754
Effective search space used: 174754
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
