Query= MSMg01no441_o05.b1 MSMg01no441_o05.b1 CHROMAT_FILE:
MSMg01no441_o05.b1 PHD_FILE: MSMg01no441_o05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:08:50 2005
(192 letters)
>mm_chr2_172876453_172877044
Length = 592
Score = 327 bits (169), Expect = 3e-94
Identities = 184/193 (95%), Gaps = 8/193 (4%)
Strand = Plus / Plus
Query: 1 gacacttagtggatggaacccttggcggactactaaacccataatgccccctgctgggtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gacacttagtggatggaacccttggcggactactaaacccataatgccccctgctgggtg 260
Query: 61 gtgtctaaagctggaagccccaatcctcactctatgtgacccagggcagctgtgtcagcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtgtctaaagctggaagccccaatcctcactctatgtgacccagggcagctgtgtcagcc 320
Query: 121 cctct----tttttttattctctatgtgttcaccatagaagtcccttctgaccaagatgc 176
||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 321 cctctgggcttt----attctctatgtgttcacgatagaagtcccttctgaccaagatgc 376
Query: 177 acagatactccag 189
|||||||||||||
Sbjct: 377 acagatactccag 389
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 192
Length of database: 592
Length adjustment: 8
Effective length of query: 184
Effective length of database: 584
Effective search space: 107456
Effective search space used: 107456
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no441_o05.g1 MSMg01no441_o05.g1 CHROMAT_FILE:
MSMg01no441_o05.g1 PHD_FILE: MSMg01no441_o05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:08:50 2005
(244 letters)
>mm_chr2_173040320_173040963
Length = 644
Score = 451 bits (233), Expect = e-131
Identities = 241/244 (98%)
Strand = Plus / Minus
Query: 1 ttctgggnggaattggagttatagatagctgtgagccaccatgaaggtgctgagccctgg 60
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 ttctgggtggaattggagttatagatagctgtgagccaccatgaaggtgctgagccctgg 493
Query: 61 atcctctagaagagcagccagtgctctacccagtcaaccacgtctccacaatacccttta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 492 atcctctagaagagcagccagtgctctacccagtcaaccacgtctccacaatagccttta 433
Query: 121 gagaggtgttccaggagggagggttgctgccaggattaaggagggagagccaaccagttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 432 gagaggtgttccaggagggagggttgctgccaggattaaggagggagagccaaccagctg 373
Query: 181 ctggtcttggctggtaagggcctgcttgcctcattcgcagtgcccatagggtctccagct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 ctggtcttggctggtaagggcctgcttgcctcattcgcagtgcccatagggtctccagct 313
Query: 241 attg 244
||||
Sbjct: 312 attg 309
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
