Query= MSMg01no442_d07.b1 MSMg01no442_d07.b1 CHROMAT_FILE:
MSMg01no442_d07.b1 PHD_FILE: MSMg01no442_d07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:09:16 2005
(247 letters)
>mm_chr2_95615752_95616397
Length = 646
Score = 437 bits (226), Expect = e-127
Identities = 241/246 (97%), Gaps = 1/246 (0%)
Strand = Plus / Plus
Query: 1 agaagaattaccatttagattcactgctgacttggctcaggagatttgttttgatattaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agaagaattaccatttagattcactgctgacttggctcaggagatttgttttgatattaa 260
Query: 61 gggagcatttttgtatcaacatcatcccttcaagctatgctgttattgcagatttcaaaa 120
||| |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 261 gggggcatttttgtatcaacatcatccctttaagctatgctgttattgcaggtttcaaaa 320
Query: 121 aaaaattgcaaactaataaaatctaagggaatccttcaggtttctagagagtttaaattc 180
|||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 321 aaaa-ttgcaaactaataaaatctaagggaaaccttcaggtttctagagagtttaaattc 379
Query: 181 cacatgtgcagagtgtcagctttaagtaagtcatgcaaaactctatttaaatgattccgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 cacatgtgcagagtgtcagctttaagtaagtcatgcaaaactctatttaaatgattccgc 439
Query: 241 ctttcc 246
||||||
Sbjct: 440 ctttcc 445
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 247
Length of database: 646
Length adjustment: 9
Effective length of query: 238
Effective length of database: 637
Effective search space: 151606
Effective search space used: 151606
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no442_d07.g1 MSMg01no442_d07.g1 CHROMAT_FILE:
MSMg01no442_d07.g1 PHD_FILE: MSMg01no442_d07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:09:16 2005
(338 letters)
>mm_chr2_95824778_95825514
Length = 737
Score = 630 bits (326), Expect = 0.0
Identities = 335/338 (99%), Gaps = 1/338 (0%)
Strand = Plus / Minus
Query: 1 actaaatggaacaggagcatggatgcctaataaatctatctttaaaataggaaaatatgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 actaaatggaacaggagcatggatgcctaataaatctatctttaaaataggaaaatatgc 478
Query: 61 attgcaactttccactatcttgtcctgttatctgcaacaatttcttccatctgaaacaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 attgcaactttccactatcttgtcctgttatctgcaacaatttcttccatctgaaacaac 418
Query: 121 agtgagctgtggtaggtatcacaagtaaaatggctgcaaacttcggactatatgatgaat 180
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 417 agtgagctgtggtaggtatcacaagtaaaat-gctgcaaacttcggactatatgatgaat 359
Query: 181 cctgagctgggaaggagacaagtacaacaccacttttggatccaggtggggaggctaccc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 cctgagctgggaaggagacaagtacaacaccacttttggatccaggtggggaggctaccc 299
Query: 241 aggctggtatgtacctgtctatgagcatgaatcaatatgatggcagctcagtgcatttga 300
||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 298 aggctgggatgtacctgtctatgagcatgaatcaatacgatggcagctcagtgcatttga 239
Query: 301 agaaaagccaagaggccattcttaagaagaataaataa 338
||||||||||||||||||||||||||||||||||||||
Sbjct: 238 agaaaagccaagaggccattcttaagaagaataaataa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 338
Length of database: 737
Length adjustment: 9
Effective length of query: 329
Effective length of database: 728
Effective search space: 239512
Effective search space used: 239512
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
