MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-442G06
Chromosome	2 (Build37)
Map Location	107,139,401 - 107,139,777
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Dcdc5, 9330126M15, C130023O10Rik, LOC677260, 2700007P21Rik, LOC383739, Fshb, Kcna4
Downstream gene	none
Link	Open Mouse BAC browser

Click to get alignment info.

name	Dcdc5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:329482 MGI:3045363
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	9330126M15 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:329483
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	C130023O10Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320230 MGI:2443634
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC677260 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:677260
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs, 10 Proteins pseudo : _no_value

name	2700007P21Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:212772 MGI:1926020
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC383739 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:383739
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 Proteins pseudo : _no_value

name	Fshb (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14308 MGI:95582
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Kcna4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16492 MGI:96661
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dcdc5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149249922 GeneID:329482 MGI:3045363
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : doublecortin domain containing 5 transcript_id : XM_001481324.1

name	9330126M15 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149249996 GeneID:329483
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein 9330126M15 transcript_id : XM_001479919.1

name	C130023O10Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31342825 GeneID:320230 MGI:2443634
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA C130023O10 gene transcript_id : NM_177110.2

name	2700007P21Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:68299773 GeneID:212772 MGI:1926020
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2700007P21 gene transcript_id : NM_001025102.1

name	2700007P21Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:68299772 GeneID:212772 MGI:1926020
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2700007P21 gene transcript_id : NM_173750.2

name	Fshb (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40254640 GeneID:14308 MGI:95582
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : follicle stimulating hormone beta transcript_id : NM_008045.2

name	Kcna4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142358254 GeneID:16492 MGI:96661
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : potassium voltage-gated channel, shaker-related subfamily, member 4 transcript_id : NM_021275.3

name	Dcdc5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149249923 GeneID:329482 MGI:3045363
definition	codon_start : 1 exception : unclassified translation discrepancy note : overriding stop codons product : doublecortin domain containing 5 protein_id : XP_001481374.1 transl_except : (pos:106038106..106038108,aa:OTHER) transl_except : (pos:106038133..106038135,aa:OTHER) transl_except : (pos:106038151..106038153,aa:OTHER) transl_except : (pos:106042976..106042978,aa:OTHER) transl_except : (pos:106043000..106043002,aa:OTHER) transl_except : (pos:106043009..106043011,aa:OTHER) transl_except : (pos:106050947..106050949,aa:OTHER) transl_except : (pos:106054333..106054335,aa:OTHER) transl_except : (pos:106054366..106054368,aa:OTHER) transl_except : (pos:106062203..106062205,aa:OTHER) transl_except : (pos:106062215..106062217,aa:OTHER) transl_except : (pos:106062260..106062262,aa:OTHER) transl_except : (pos:106070349..106070351,aa:OTHER) transl_except : (pos:106168914..106168916,aa:OTHER) transl_except : (pos:106168983..106168985,aa:OTHER) transl_except : (pos:106169061..106169063,aa:OTHER) transl_except : (pos:106176125..106176127,aa:OTHER) transl_except : (pos:106176185..106176187,aa:OTHER) transl_except : (pos:106185586..106185588,aa:OTHER) transl_except : (pos:106185631..106185633,aa:OTHER) transl_except : (pos:106189911..106189913,aa:OTHER) transl_except : (pos:106189920..106189922,aa:OTHER) transl_except : (pos:106189926..106189928,aa:OTHER) transl_except : (pos:106191687..106191689,aa:OTHER) transl_except : (pos:106191720..106191722,aa:OTHER) transl_except : (pos:106191738..106191740,aa:OTHER) transl_except : (pos:106197277..106197279,aa:OTHER) transl_except : (pos:106197316..106197318,aa:OTHER) transl_except : (pos:106198698..106198700,aa:OTHER) transl_except : (pos:106198731..106198733,aa:OTHER) transl_except : (pos:106198842..106198844,aa:OTHER) transl_except : (pos:106198845..106198847,aa:OTHER) transl_except : (pos:106202224..106202226,aa:OTHER) transl_except : (pos:106202263..106202265,aa:OTHER) transl_except : (pos:106202269..106202271,aa:OTHER) transl_except : (pos:106205575..106205577,aa:OTHER) transl_except : (pos:106205626..106205628,aa:OTHER) transl_except : (pos:106205665..106205667,aa:OTHER) transl_except : (pos:106205683..106205685,aa:OTHER) transl_except : (pos:106205692..106205694,aa:OTHER) transl_except : (pos:106205716..106205718,aa:OTHER) transl_except : (pos:106205728..106205730,aa:OTHER) transl_except : (pos:106208164..106208166,aa:OTHER) transl_except : (pos:106209846..106209848,aa:OTHER) transl_except : (pos:106209867..106209869,aa:OTHER) transl_except : (pos:106209888..106209890,aa:OTHER) transl_except : (pos:106212590..106212592,aa:OTHER) transl_except : (pos:106212614..106212616,aa:OTHER) transl_except : (pos:106217216..106217218,aa:OTHER) transl_except : (pos:106217273..106217275,aa:OTHER) transl_except : (pos:106218066..106218068,aa:OTHER) transl_except : (pos:106224329..106224331,aa:OTHER) transl_except : (pos:106224344..106224346,aa:OTHER) transl_except : (pos:106225615..106225617,aa:OTHER) transl_except : (pos:106225663..106225665,aa:OTHER) transl_except : (pos:106241276..106241278,aa:OTHER)

name	9330126M15 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149249997 GeneID:329483
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479969.1

name	C130023O10Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28893049 GeneID:320230 MGI:2443634
definition	codon_start : 1 product : hypothetical protein LOC320230 protein_id : NP_796084.1

name	2700007P21Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:68299774 CCDS:CCDS16503.1 GeneID:212772 MGI:1926020
definition	codon_start : 1 product : hypothetical protein LOC212772 protein_id : NP_001020273.1

name	2700007P21Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27819655 CCDS:CCDS16503.1 GeneID:212772 MGI:1926020
definition	codon_start : 1 product : hypothetical protein LOC212772 protein_id : NP_776111.1

name	Fshb (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679865 CCDS:CCDS16504.1 GeneID:14308 MGI:95582
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA] GO_function : GO:0005179 - hormone activity [Evidence IEA] codon_start : 1 product : follicle stimulating hormone beta protein_id : NP_032071.1

name	Kcna4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31543026 CCDS:CCDS16505.1 GeneID:16492 MGI:96661
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0008076 - voltage-gated potassium channel complex [Evidence IEA] GO_function : GO:0005216 - ion channel activity [Evidence IEA]; GO:0005267 - potassium channel activity [Evidence IEA]; GO:0030955 - potassium ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0005244 - voltage-gated ion channel activity [Evidence IEA]; GO:0005249 - voltage-gated potassium channel activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0006813 - potassium ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : potassium voltage gated channel, shaker related subfamily, member 4 product : potassium voltage-gated channel, shaker-related subfamily, member 4 protein_id : NP_067250.2

name	LOC383739 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:383739
definition	number : 1 pseudo : _no_value

name	LOC677260 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149249924 GeneID:677260
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs, 10 Proteins product : similar to Ac2-008 pseudo : _no_value transcript_id : XR_034184.1

clone name	MSMg01-266A19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-324E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-539K22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-278F08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-096J03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-343M14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-487B02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-506I01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-137E07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-188I07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-418A07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-298A03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-119L14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-341C04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-546P23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-361H11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-526J02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-479O03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-489C17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-186N16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-433L22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-117K18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-459E06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-542P22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-411J03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-367D08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-231M11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-455F16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-119O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-278A20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-073F05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-116I12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-126D23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-538K23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-276N22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-425J06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-376N15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-508I06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-472L15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-341B23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-541N01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-452D01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-279N21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-377P18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-144A03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-369H04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-276O03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-396O17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-134F13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-462M15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-328G02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-531D07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-504N19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-100P05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-540P14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-185J21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-101L10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-433B08
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-378J24
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-445H06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-482L21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-501F21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-376B18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-471K22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-362C20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-319C02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-086E10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-442G06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-338C14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-369I06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-127C09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-393G01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-274B23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-446G03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-410A12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-144E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-115I20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-413D18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-481C07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-214G06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-490C24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-099I03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-206H17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-147I13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-320F06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-142A02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-049I10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-184O08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-512K05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-187D12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-392K01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-272I16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-455N22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-483A01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-534P14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-391D05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-147C18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-396D06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-155M08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-173D11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-115K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-471A01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-407M18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-410H17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-316D06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-045N22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-168B02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-189I23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-410D22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-410B22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-407C19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-516O20
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-499M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-356A12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-408B23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-527O09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-472I04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-394C15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-363L18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-317K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094A24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163F10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264C09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-038G13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103J14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-209A01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-083H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323N20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-139O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322B17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-259F21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-191F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348P18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-178J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252A10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137C13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021A08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-133A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137M07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343M01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-153E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109B08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-052O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133J09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-241P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261C01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-261C03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-210K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322I01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-002M19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201D18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-207J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330O24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-164A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119L20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240C07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180A08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-026O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159A04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-128E24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-148D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266F10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221N21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228K15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-008E19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-325G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133G24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-339O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278B02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248M08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-326A10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047K09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-256M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102H02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-216J18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-144J02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-276E16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-144L16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-305A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-220I08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-291G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139H13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-154O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-108L15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-123B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169H18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042D21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-259G18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-280P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020B02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-035J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301P08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-270D14
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-442G06.T7 (MSMg01no442_g06.b1)	MSMg01-442G06.TJ (MSMg01no442_g06.g1)
ACC	AG532048	AG532049
length	819	781
length of high quality (start - end)	275 (51 - 325)	377 (81 - 457)
definition	CHROMAT_FILE: MSMg01no442_g06.b1 PHD_FILE: MSMg01no442_g06.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 19:09:32 2005	CHROMAT_FILE: MSMg01no442_g06.g1 PHD_FILE: MSMg01no442_g06.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 19:09:32 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	GAGGCTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CGCGGAATTCTTTGTTTAGCTCTGAGCCCCATTTTTTAATGGGGTTATTT GATTTTCTGGAATCCACCTTCTTGAGTTCTTTATATATATTGGGTATTAG TCCCCTATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTAGTG ACCTTTTTCTCTTATTGATGGTGTCTTTTGTCTTTCAGAAGATTTGCAAT TTTATGAGGTCCCATTTGTTGATTCTCAATTTTACAGCACAAGCCATTGC TGTTCTATTCAGGAATTTTCCCCCTGTGTTTATATCTTCGAGGCTTTTCC CCACTTTCTCCTCTATAAGTTTCAGTGGCTCTGGTTTTATGTGGAGTTCC TTGATCTACTTAGATTCGCCCTTATTTCCTTCGTATGGGAAGGGTTTTCT CCGTTTTTCTTCCCTCATGTAATATTCTTTTGTCGTTCTTTTCCCCCTTT TTTTTGACACTTCTTCTTTATCTTCCCTCGTATGGTCTCTTTCTCTCTTG GTGTTTGGATTGTCTCTACTTTTTCTCTGTCGTCGTTCTTCGTTTCTCTT TTTTTTTATGTTCATTCACTTTTGACCTCGTCCTCCTTCCCTTTTTTTTT ATTTTTTTTTATTTTCTCGCTCCTCTCCTCCTTTTTTGTCTTCTTACTTT TTTTACTTCTCCCGCTCTCTTTTTTCCTTCTCTTCTTGTTCTCTCCCCTC CTCTCCTTTGTTTTCCTTTTACTCTCCCCCCTCTTTGTTTATTTTTCCTA CTTTGTTCTTTCGCCTCTG	ATGGGCGATGATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCTAGTCATGTGCTTTCATTC CAAATATTATTAGAATGTCATTCAAAGTGTGTTTTCCTCTATGCAAAATG CATTTATCTTAGAGTGTGTCTATTGATTCTACATTGAGAAGAAACTTCAA AGCCCCCTTGCCTTGAGTTTGGGCATTTCTGCATGAAGTACTTGTTCATG TGAAAGTTGGGTGTCCAGTACAGCTTTGAGTTAACAGTCAATTCCCAAGT TGAAGCTATTCAAAGTACTTTGGAACCCTTTGTGAAGATTTCCTACTGGG GAAAATGCTGCTGTATAAACTGATTTAGGAAACTGTATTTTCTTAGATGC CAATAAGTAGGTTTGAAATACATACAGGTTCACCATACAGGGAAGAAAAA AAGAAAGTGATCCCTATTCAAAATCAGGATGCTTGAGGACAGAAGTCCTT TTTACATGGTATTCAAATACATTCTTTCCTTCTTGCTAATGGGTAAAAAA AGAACCCCACCATGCTCCATGGGTACAGCTGCATTTACTTTTTCTCTTCT CTTTCCTCCTTTTTTTCTTCTTTCCTCTCTCCCCTTCGTTCCTGTCTTCT TCCGCTTATCCACCTCTCTTCTCCCCCTTCTTTTTCTTTTTCTCCCCTCT TTCTTTTTTTCCCACTCCCCTCCCTTTCTTTCCCTCCCCGTTCTCCTCTC TTATTTCTCTTTTTTCTTTTTTTCTCTCCTG
quality values	Open. Hide. 6 8 8 8 8 8 8 8 8 8 8 8 8 11 19 37 30 18 13 14 16 9 9 9 10 10 12 24 32 34 11 11 10 9 10 11 11 8 11 9 8 8 8 16 18 28 28 28 28 25 29 41 47 57 36 36 36 31 33 33 50 47 47 59 25 23 12 11 11 11 15 15 25 26 37 37 41 33 33 36 36 36 38 59 57 57 57 53 53 53 53 53 57 59 59 59 59 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 54 54 54 54 48 50 57 57 68 57 57 57 46 40 46 46 57 57 57 57 57 68 68 68 68 68 68 68 57 57 57 68 68 57 57 57 57 59 57 57 59 59 68 68 68 68 68 50 50 47 47 46 50 59 50 50 50 50 50 50 52 52 43 52 52 57 57 54 52 52 59 59 57 57 59 68 59 59 57 57 57 57 57 68 68 57 57 57 57 57 57 57 59 59 59 59 59 59 59 57 57 57 57 57 57 57 57 57 52 52 52 52 52 52 52 50 50 50 59 57 59 57 57 57 57 57 57 57 57 48 50 50 50 57 41 30 32 28 28 42 44 59 44 44 28 28 28 30 36 42 43 44 59 44 57 43 44 44 36 36 43 43 44 37 36 28 28 36 44 47 46 46 43 36 36 32 32 35 42 42 46 43 37 43 43 43 59 39 39 35 37 36 43 43 57 28 28 13 13 13 28 28 48 48 48 47 47 39 32 31 15 15 9 8 8 9 6 8 6 9 13 19 37 41 39 39 36 36 26 28 13 17 17 30 30 48 48 39 39 30 30 30 33 39 39 39 39 30 32 19 20 15 16 10 14 14 18 23 34 34 19 19 11 11 11 18 18 28 24 20 20 12 11 11 16 18 28 31 32 32 37 28 19 18 12 16 15 15 13 14 10 10 8 8 8 9 12 21 18 18 18 19 15 15 11 11 13 16 12 10 10 11 12 15 12 15 12 10 8 8 8 8 8 8 8 8 8 8 8 8 9 10 8 8 8 8 8 8 12 8 13 14 15 24 22 20 13 16 8 8 8 8 8 8 8 8 8 8 8 8 8 10 10 10 10 10 13 8 8 8 8 8 8 8 8 8 8 8 8 6 6 6 6 7 11 10 11 10 12 16 14 12 10 9 11 11 12 9 9 9 9 9 9 13 13 11 9 10 10 10 11 8 8 8 10 8 8 8 8 9 13 13 10 10 8 8 8 10 13 13 12 6 6 6 8 8 10 8 8 8 8 8 10 9 9 9 8 8 8 8 8 8 8 8 8 8 8 10 10 13 12 8 8 8 8 10 10 8 8 10 8 8 6 6 8 8 8 10 10 10 11 11 11 10 10 9 9 9 9 11 10 9 10 8 8 7 7 8 8 6 6 6 6 11 10 13 8 8 8 8 6 6 6 6 8 8 8 8 8 8 12 10 16 12 12 9 9 13 13 17 20 17 15 11 11 11 13 9 9 9 14 14 23 21 18 8 10 8 8 8 8 8 10 10 11 10 10 10 10 8 10 10 10 10 8 8 8 8 10 11 18 23 18 18 14 10 7 6 8 8 8 8 8 8 8 10 10 21 23 15 18 13 10 8 8 6 6 6 6 8 8 8 8 8 8 10 10 12 8 8 10 10 10 13 12 13 9 8 8 8 8 13 13 8 8 8 8 10 10 10 10 10 8 6 8 8 8 8 8 8 8 8 9 10 10 16 11 11 11 22 22 8 8 6 7 13 15 8 7 7 8 6 6 6 9 7 11 10 10 15 11 9 9 9 9 9 12 12 12 9 13 10 10 8 10 9 9 9 9 13 13 11 11 10 10 10 9 9 9 10 11 12 10 8 8 6 6	Open. Hide. 12 17 19 13 9 9 8 12 15 10 8 8 8 8 8 13 22 19 15 15 14 22 22 30 25 22 22 22 28 24 26 32 29 13 18 8 8 8 10 11 10 15 22 14 17 17 33 27 39 57 57 53 39 36 36 36 36 43 43 59 59 59 57 35 32 19 20 26 26 42 42 57 57 57 41 42 50 50 50 51 59 68 59 54 54 54 57 57 57 68 68 68 68 57 57 57 57 57 51 50 47 47 47 57 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 50 50 50 50 50 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 50 68 68 68 57 57 59 59 68 68 68 68 68 68 68 59 57 57 57 57 57 57 68 68 68 68 68 68 68 68 57 57 57 68 68 68 68 68 68 57 44 38 27 14 14 38 38 59 59 59 59 59 59 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 59 59 59 68 59 59 59 57 57 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 44 38 27 18 20 27 27 41 34 43 43 44 44 57 57 57 57 57 57 59 59 59 59 59 59 57 57 59 57 57 57 57 59 59 54 48 48 48 47 46 43 43 43 48 48 54 57 59 54 54 54 54 46 48 46 46 59 59 59 68 59 59 43 43 43 43 43 57 48 48 37 41 37 43 39 47 30 37 28 28 28 32 41 25 18 18 23 23 30 34 34 37 30 22 22 28 27 27 30 30 32 39 39 39 40 34 25 19 13 13 13 24 24 28 28 23 28 28 32 28 28 23 23 18 22 24 30 24 24 20 28 28 24 17 20 12 12 10 10 10 10 10 18 20 22 22 12 12 13 17 15 20 12 11 10 11 17 13 11 8 8 8 13 8 8 8 13 13 19 15 12 12 13 10 10 10 18 11 10 16 10 9 9 10 15 12 12 11 11 8 8 6 6 7 7 19 18 11 10 6 8 6 7 11 8 9 9 13 13 12 22 12 11 11 11 10 10 13 9 9 10 8 8 8 11 9 8 8 8 7 10 6 6 10 10 8 6 6 8 10 10 10 8 8 10 9 9 10 9 9 11 12 10 9 9 8 7 6 8 8 8 8 8 8 8 8 8 8 8 18 12 8 8 8 12 8 8 8 8 10 10 13 10 10 10 12 16 31 18 18 13 13 10 10 11 10 9 9 10 9 9 8 8 10 8 8 8 10 8 8 8 8 10 15 11 11 9 10 9 9 9 9 8 8 8 8 8 8 8 8 7 9 9 17 11 11 11 13 8 6 6 6 6 8 10 11 11 11 8 8 8 10 10 14 14 12 10 8 10 10 19 19 9 9 11 11 11 11 11 11 10 10 10 10 9 10 10 11 11 10 11 8 8 8 9 6 8 10 8 8 6 7 9 9 10 10 12 15 8 8 8 8 8 9 8 10 10 15 8 8 8 8 12 12 11 12 10 8 8 11 10 10 12 8 6 6 8 8 8 7 9 9 10 8 8 8 12 12 19 11 11 8 8 8 8 13 15 13 10 10 10 8 8 8 10 8 8 6 6

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no442_g06.g1 MSMg01no442_g06.g1 CHROMAT_FILE:
MSMg01no442_g06.g1 PHD_FILE: MSMg01no442_g06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:09:32 2005
         (377 letters)



>mm_chr2_107139201_107139977
          Length = 777

 Score =  729 bits (377), Expect = 0.0
 Identities = 377/377 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctagtcatgtgctttcattccaaatattattagaatgtcattcaaagtgtgttttcctct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctagtcatgtgctttcattccaaatattattagaatgtcattcaaagtgtgttttcctct 260

                                                                       
Query: 61  atgcaaaatgcatttatcttagagtgtgtctattgattctacattgagaagaaacttcaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atgcaaaatgcatttatcttagagtgtgtctattgattctacattgagaagaaacttcaa 320

                                                                       
Query: 121 agcccccttgccttgagtttgggcatttctgcatgaagtacttgttcatgtgaaagttgg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agcccccttgccttgagtttgggcatttctgcatgaagtacttgttcatgtgaaagttgg 380

                                                                       
Query: 181 gtgtccagtacagctttgagttaacagtcaattcccaagttgaagctattcaaagtactt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtgtccagtacagctttgagttaacagtcaattcccaagttgaagctattcaaagtactt 440

                                                                       
Query: 241 tggaaccctttgtgaagatttcctactggggaaaatgctgctgtataaactgatttagga 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tggaaccctttgtgaagatttcctactggggaaaatgctgctgtataaactgatttagga 500

                                                                       
Query: 301 aactgtattttcttagatgccaataagtaggtttgaaatacatacaggttcaccatacag 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aactgtattttcttagatgccaataagtaggtttgaaatacatacaggttcaccatacag 560

                            
Query: 361 ggaagaaaaaaagaaag 377
           |||||||||||||||||
Sbjct: 561 ggaagaaaaaaagaaag 577


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 377
Length of database: 777
Length adjustment: 9
Effective length of query: 368
Effective length of database: 768
Effective search space:   282624
Effective search space used:   282624
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information