Query= MSMg01no442_m16.b1 MSMg01no442_m16.b1 CHROMAT_FILE:
MSMg01no442_m16.b1 PHD_FILE: MSMg01no442_m16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:10:07 2005
(366 letters)
>mm_chr2_70547877_70548641
Length = 765
Score = 594 bits (307), Expect = e-174
Identities = 349/363 (96%), Gaps = 1/363 (0%)
Strand = Plus / Plus
Query: 4 ggaattcactttgttgaccaggctggcctcgaactcagaaatctgcctcccaagtgctgt 63
|||||||| ||||| |||||||||||||| ||||||||||||||||||||| |||||||
Sbjct: 204 ggaattcattttgtagaccaggctggccttgaactcagaaatctgcctcccgagtgctgg 263
Query: 64 gattaatggtgtgcgccaccaccgcctggcccgtcttctcctcttctgatgcatcagtga 123
|||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 264 gattaaaggtgtgcgccaccaccgcctggcccgtct-ctcctcttctgatgcatcagtga 322
Query: 124 gcatgtggctgttacgtcagcttcctctattgaagagcagtccgtccatccacccatctt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 gcatgtggctgttacgtcagcttcctctattgaagagcagtccgtccatccacccatctt 382
Query: 184 acttcaaacgactgagacacagaaagatgacggaaaagcacagcagagctctgctcatag 243
|||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||
Sbjct: 383 acttcaaacgactgagacacagaaagataacggaaaagcacagcagagctctgcgcatag 442
Query: 244 ccatcactggctaaagcagggtccttctagcccatttctgggtatcccctccagaatcct 303
||||||||||| | |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 443 ccatcactggccacagcagggtccttctagcccagctctgggtatcccctccagaatcct 502
Query: 304 ttcttagggacagagaacctagacaacagctgttaccatcctgcttccaaaactgtggtg 363
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 ttcctagggacagagaacctagacaacagctgttaccatcctgcttccaaaactgtggtg 562
Query: 364 agg 366
|||
Sbjct: 563 agg 565
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 366
Length of database: 765
Length adjustment: 9
Effective length of query: 357
Effective length of database: 756
Effective search space: 269892
Effective search space used: 269892
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no442_m16.g1 MSMg01no442_m16.g1 CHROMAT_FILE:
MSMg01no442_m16.g1 PHD_FILE: MSMg01no442_m16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:10:07 2005
(411 letters)
>mm_chr2_70699380_70700190
Length = 811
Score = 733 bits (379), Expect = 0.0
Identities = 403/411 (98%)
Strand = Plus / Minus
Query: 1 caggccaatcaggactactgcatagtgagatgctgtcttaaataaatgaacaaataaaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 caggccaatcaggactactgcatagtgagatgctgtcttaaataaatgaacaaataaaga 602
Query: 61 aagaaaaatttaaaagtaagaaaatacaaattaaaagctgcttgagtctcatctattgat 120
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 601 aagaaaaatttaaaagtaaggaaatacaaattaaaagctgcttgagtctcatctattgat 542
Query: 121 gatgactttaaaatatctcctataaatgacacaaataattttaacttctgtcagtttcat 180
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 541 gatgactttaaaatatctcctataaatgtcacaaataattttaacttctgtcagtttcat 482
Query: 181 tgccttgcctaaatttaaatgtctaaggtcaagcctactttttttttatgcaccccaggt 240
|||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||
Sbjct: 481 tgccttgcctaaatttaaatttctaaggccaagcctactttttttttatgcaccccaggt 422
Query: 241 cactggactttaactgtaaaatgtgctctatgcaagtcatcttaacaatgcggagaatga 300
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cactggaccaaaactgtaaaatgtgctctatgcaagtcatcttaacaatgcggagaatga 362
Query: 301 agcacagattccaggccacgcactagaagcaattgcaaacaccatcaaaacacagaccga 360
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 agcacagattccaggccacacactagaagcaattgcaaacaccatcaaaacacagaccga 302
Query: 361 aattataaacccttttaaacagtgaaacttagcagtgtgcagataattaaa 411
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aattataaacccttttaaacagtgaaacttagcagtgtgcagataattaaa 251
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 411
Length of database: 811
Length adjustment: 9
Effective length of query: 402
Effective length of database: 802
Effective search space: 322404
Effective search space used: 322404
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
