Query= MSMg01no442_o07.b1 MSMg01no442_o07.b1 CHROMAT_FILE:
MSMg01no442_o07.b1 PHD_FILE: MSMg01no442_o07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:10:17 2005
(399 letters)
>mm_chr2_92060448_92061246
Length = 799
Score = 706 bits (365), Expect = 0.0
Identities = 387/399 (96%), Gaps = 8/399 (2%)
Strand = Plus / Plus
Query: 1 atattctgattttacataacatagtgtataaaccctagaggagagattgtcattgatgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atattctgattttacataacatagtgtataaaccctagaggagagattgtcattgatgtt 260
Query: 61 ttaaacccagagagattaagtaaatataatgaaaactagaaatcctaagaatatactttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttaaacccagagagattaagtaaatataatgaaaactagaaatcctaagaatatactttt 320
Query: 121 tagctaacgattccatcaggctctgtgagcttaatcttacaaaaggcttcgggatgctca 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 321 tagctaacgattccatcaggctctgtgagcttaatcttacaaaaggcttcgggacgctca 380
Query: 181 ggttgaggactgtatgtgcctaagtggttgctggagaacctggtggttgtgagtcttcta 240
|| ||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 381 ggctgaggactgtatgtg--------gttgctggagaacctggtggttgtgagtcttcta 432
Query: 241 gtcaggtactggttttccttcctcagcattaaaaggcagtgctagctaagctctcatagg 300
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 433 gtcaggtactggttttccttcctcagtattaaaaggcagtgctagctaagctctcatagg 492
Query: 301 tataaggaagaaaacagatttttaataacgtttaaatttattcagacaaaagatgctttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 493 tataaggaagaaaacagatttttaataacgtttaaatttattcagacaaaaaatgctttt 552
Query: 361 gctttaataaataaccccaaatcatggtcacattttaga 399
|||||||||||||||||||||||||||||||||||||||
Sbjct: 553 gctttaataaataaccccaaatcatggtcacattttaga 591
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 399
Length of database: 799
Length adjustment: 9
Effective length of query: 390
Effective length of database: 790
Effective search space: 308100
Effective search space used: 308100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no442_o07.g1 MSMg01no442_o07.g1 CHROMAT_FILE:
MSMg01no442_o07.g1 PHD_FILE: MSMg01no442_o07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:10:17 2005
(245 letters)
>mm_chr2_92207120_92207764
Length = 645
Score = 458 bits (237), Expect = e-133
Identities = 243/245 (99%)
Strand = Plus / Minus
Query: 1 accaaagaagcttcgagtgaagaacaagcacgcagaattcttccgtaatctgcacttgac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 accaaagaagcttcgagtgaagaacaagcacgcagaattcttccgtaatctgcacttgac 386
Query: 61 ctttctggggtatgatgggaagctactgcgaagagagctctttggatgccccaaccagtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ctttctggggtatgatgggaagctactgcgaagagagctctttggatgccccaaccagtt 326
Query: 121 tcctcctggggccgagcaggtgagatggggccatgctggcttgcctttggaaggtcttgc 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ccctcctggggccgagcaggtgagatggggccatgctggcttgcctttggaaggtcttgc 266
Query: 181 ccctctgtactgaaggacacgttgttctttcgttcctggaaccctgctcagttgcaacag 240
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ccctctgtactgaaggacatgttgttctttcgttcctggaaccctgctcagttgcaacag 206
Query: 241 gccct 245
|||||
Sbjct: 205 gccct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 645
Length adjustment: 9
Effective length of query: 236
Effective length of database: 636
Effective search space: 150096
Effective search space used: 150096
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
