Query= MSMg01no442_o15.b1 MSMg01no442_o15.b1 CHROMAT_FILE:
MSMg01no442_o15.b1 PHD_FILE: MSMg01no442_o15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:10:19 2005
(242 letters)
>mm_chr2_117936067_117936708
Length = 642
Score = 439 bits (227), Expect = e-128
Identities = 238/242 (98%)
Strand = Plus / Minus
Query: 1 gggacgncagcggcggcgatgcttctccagctgtggccctgcgtgagcaggcttggctct 60
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 gggacgtcagcggcggcgatgcttctccagctgtggccctgcgtgagcaggcttggctct 383
Query: 61 gagtccagggacccaggtaaaagcatcaccaaataaggatcttggcagaatcagggcggg 120
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 gagtccagggatccaggtaaaagcatcaccaaataaggatcttggcagaatcagggcggg 323
Query: 121 gccggctgagggacagctggggctccctccccttatcagttacacctggctggactccct 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 gccggctgagggacagctggggctccctccccttatcagttacacctggctggactccca 263
Query: 181 taccttggaaacacccaggactttatgctcatcacacagcaatttcactttccttgtgtg 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 aaccttggaaacacccaggactttatgctcatcacacagcaatttcactttccttgtgtg 203
Query: 241 gg 242
||
Sbjct: 202 gg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 242
Length of database: 642
Length adjustment: 9
Effective length of query: 233
Effective length of database: 633
Effective search space: 147489
Effective search space used: 147489
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no442_o15.g1 MSMg01no442_o15.g1 CHROMAT_FILE:
MSMg01no442_o15.g1 PHD_FILE: MSMg01no442_o15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:10:19 2005
(316 letters)
>mm_chr2_117752927_117753638
Length = 712
Score = 513 bits (265), Expect = e-150
Identities = 300/315 (95%), Gaps = 8/315 (2%)
Strand = Plus / Plus
Query: 1 accatgtgatttgcatatgaactgtatctgtctgtggtatagtctcgctgaggtcaatag 60
|||||||||||||||| |||| |||||||||||||||||||||| |||||||||||||
Sbjct: 201 accatgtgatttgcatgtgaa---tatctgtctgtggtatagtctcactgaggtcaatag 257
Query: 61 gctacctttgagcagtagttggtatcaacatagttgctccagaggggaaacagaggccat 120
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 gctacccttgagcagtagttggtatcaacatagttgctccagaggggaaacagaggccat 317
Query: 121 ggagtaatatcagatgattaactcctgttctaaggtgaattgaatttgtgatctttagta 180
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 ggagtaatatcagatggttaactcctgttctaaggtgaattgaatttgtgatctttagta 377
Query: 181 attacttcttctctgtaatcttaaatttcttgctttcgttttatactatgaagcctgaag 240
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 378 attacttcttctctgtaatcttaaattccttgctttcgttttatactatgaagcctgaag 437
Query: 241 tgatg--tttttatttcccaccaattgtctttgagaacattgtctaatttatttatttat 298
||||| | | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 tgatggctg---agttcccaccaattgtctttgagaacattgtctaatttatttatttat 494
Query: 299 tgcaattatttttta 313
|||||||||||||||
Sbjct: 495 tgcaattatttttta 509
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 316
Length of database: 712
Length adjustment: 9
Effective length of query: 307
Effective length of database: 703
Effective search space: 215821
Effective search space used: 215821
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
