Query= MSMg01no443_e08.b1 MSMg01no443_e08.b1 CHROMAT_FILE:
MSMg01no443_e08.b1 PHD_FILE: MSMg01no443_e08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:10:49 2005
(348 letters)
>mm_chr2_11592717_11593461
Length = 745
Score = 619 bits (320), Expect = 0.0
Identities = 340/348 (97%), Gaps = 3/348 (0%)
Strand = Plus / Minus
Query: 1 atgtaagtaggtaggtgtggctatctcaaatcacttgttatatatttaaactggatgaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 545 atgtaagtaggtaggtgtggctatctcaaatcacttgttatatatttaaactgaatgaat 486
Query: 61 taattaagatctaaagttaattgtaattacacatcagaatcataaaatactcaagaataa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 taattaagatctaaagttaattgtaattacacatcagaatcataaaatactcaagaataa 426
Query: 121 attcacccacacctacaagaagaacagacttgaaaattgcaaaagaatttctgctgagaa 180
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 attcacccacacctac---aagaacagacttgaaaattgcaaaagaatttctgctgagaa 369
Query: 181 aaaaattttaagtgaaataaacagagaaacatacactgtttataaattggagggctgatt 240
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 aaaatttttaagtgaaataaacagagaaacatacactgtttataaattggagggctgatt 309
Query: 241 tttaaaagacatgtctttttaccttcaattcaccggtttgatgtacatattagtaaaatt 300
||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 308 tttaaaagacatgtcagtttaccttcaattcactggtttgatgtacatattagtaaaatt 249
Query: 301 ggaaaattgttttcaaacttccttggaagtatctaagataactgtaag 348
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggaaaattgttttcaaacttccttggaagtatctaagataactgtaag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 348
Length of database: 745
Length adjustment: 9
Effective length of query: 339
Effective length of database: 736
Effective search space: 249504
Effective search space used: 249504
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no443_e08.g1 MSMg01no443_e08.g1 CHROMAT_FILE:
MSMg01no443_e08.g1 PHD_FILE: MSMg01no443_e08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:10:49 2005
(244 letters)
>mm_chr2_11426973_11427616
Length = 644
Score = 410 bits (212), Expect = e-119
Identities = 232/240 (96%), Gaps = 4/240 (1%)
Strand = Plus / Plus
Query: 1 agtgagccaggtctaaccttagcaaaaaggacatggaagtgtttttctcaccacaacctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtgagccaggtctaaccttagcaaaaaggacatggaagtgtttttctcaccacaacctt 260
Query: 61 tgtttctattctctggccagtgtcaccaaatccttcccagagtcgccaagatgtggttat 120
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 261 tgtttctattctctggccagtgtcaccaagtccttcccagagtcgccaagatgtggttat 320
Query: 121 caacagcagcagcacgtgactccgttgccttactcttacaccagctccttagacttaaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caacagcagcagcacgtgactccgttgccttactcttacaccagctccttagacttaaac 380
Query: 181 atttaaacctccttggtgcctgcggctcctccccagggaaagc--gggatggtggggggg 238
|||||||||||||||||||||| | |||||||||||||||||| ||| || |||||||
Sbjct: 381 atttaaacctccttggtgcctgtgcctcctccccagggaaagctgggg--ggcggggggg 438
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
