Query= MSMg01no443_n15.b1 MSMg01no443_n15.b1 CHROMAT_FILE:
MSMg01no443_n15.b1 PHD_FILE: MSMg01no443_n15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:11:34 2005
(174 letters)
>mm_chr2_5270535_5271108
Length = 574
Score = 275 bits (142), Expect = 1e-78
Identities = 169/182 (92%), Gaps = 9/182 (4%)
Strand = Plus / Minus
Query: 1 tttaaaacttgggttgaga-tttaagattggaggagggcttggaaaatctaggatattag 59
||||||||||||||||||| ||||| ||||||||||||||||||| |||||||||||||
Sbjct: 347 tttaaaacttgggttgagattttaa-cttggaggagggcttggaaactctaggatattag 289
Query: 60 tattggaacccagcatccgtgagacaacctagcctgtagctggtaccaaccatagcaggt 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 tattggaacccagcatccgtgagacaacctagcctgtagctggtaccaaccatagcaggt 229
Query: 120 ctgaatgcaagtgtttggtttttggttttg-------tgtgtgtgtgtgtgtgtgtgtgt 172
||||||||||||||||| |||||||||||| ||||| |||||||||||||||||
Sbjct: 228 ctgaatgcaagtgtttgttttttggttttggtatatatgtgtttgtgtgtgtgtgtgtgt 169
Query: 173 gt 174
||
Sbjct: 168 gt 167
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 174
Length of database: 574
Length adjustment: 8
Effective length of query: 166
Effective length of database: 566
Effective search space: 93956
Effective search space used: 93956
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no443_n15.g1 MSMg01no443_n15.g1 CHROMAT_FILE:
MSMg01no443_n15.g1 PHD_FILE: MSMg01no443_n15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:11:34 2005
(244 letters)
>mm_chr2_5054890_5055533
Length = 644
Score = 449 bits (232), Expect = e-131
Identities = 241/244 (98%)
Strand = Plus / Plus
Query: 1 tctgtcttggctcagggttttagagattgcaatctaccgtcacccatggtgtggtcagta 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctgtcttggctcagggttttagagattgcaatctaccgtcacccatggtgtggtcagtt 260
Query: 61 ctgggtctgtgatgaggcaggccatcatggtggtagaggttatgttggaaggaagacttt 120
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctgggtctgtgatgaggcagaccatcatggtggtagaggttatgttggaaggaagacttt 320
Query: 121 acctcatggtggacatgaaacagagagagggggatgggcctatgatgaagtgcatcccct 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acctcatggtggacatgaaacagagagagggggatgggcctatgatgaagtgcatcccca 380
Query: 181 agggatgtgccccaggatcctgctttcgccagtgacatcctatatcctaagcttctataa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agggatgtgccccaggatcctgctttcgccagtgacatcctatatcctaagcttctataa 440
Query: 241 cttc 244
||||
Sbjct: 441 cttc 444
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
