Query= MSMg01no444_g23.b1 MSMg01no444_g23.b1 CHROMAT_FILE:
MSMg01no444_g23.b1 PHD_FILE: MSMg01no444_g23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:12:20 2005
(192 letters)
>mm_chr2_79434843_79435434
Length = 592
Score = 333 bits (172), Expect = 5e-96
Identities = 184/188 (97%)
Strand = Plus / Plus
Query: 1 ctataaataaggtttaattgaaatgtagccacgttccttcgttgacacatcaggtcactg 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 201 ctataaataaggtttaattgaaatgtagccatgttccttcgttgacacatcaggtcactg 260
Query: 61 tctctctcccagcgaaggcctaattggttagctgcttgtcagttgttttatgtctggcga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tctctctcccagcgaaggcctaattggttagctgcttgtcagttgttttatgtctggcga 320
Query: 121 tttgtatgaaaggtgtactgacccctatcctagtctaagagtgcttttattcagatgccg 180
|||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttgtaggaaaggcgtactgacccctatcctagtctaagagtgcttttattcagatgcca 380
Query: 181 atgttaca 188
||||||||
Sbjct: 381 atgttaca 388
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 192
Length of database: 592
Length adjustment: 8
Effective length of query: 184
Effective length of database: 584
Effective search space: 107456
Effective search space used: 107456
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no444_g23.g1 MSMg01no444_g23.g1 CHROMAT_FILE:
MSMg01no444_g23.g1 PHD_FILE: MSMg01no444_g23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:12:20 2005
(507 letters)
>mm_chr2_79607707_79608613
Length = 907
Score = 882 bits (456), Expect = 0.0
Identities = 495/512 (96%), Gaps = 10/512 (1%)
Strand = Plus / Minus
Query: 1 ctcaccatcttaaacaggcatagttcaaaggacttagaatcagaccaaggggggaaaacc 60
||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 612 ctcaccatcttaaccaggcatagttcaaaggacttagaatcagaccaagggggaaaaacc 553
Query: 61 ttctacaagaatgaggctatagacaaagcccggagacataacagtcaaacaatagccgtg 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 552 ttctacaagaatgaggctatagacaaagcccggagacataacagtcaaacaatagctgtg 493
Query: 121 tatatttccaaagaatcaagcgaagctctgcattgctgcagtgggggtgggaagaagaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 tatatttccaaagaatcaagcgaagctctgcattgctgcagtgggggtgggaagaagaaa 433
Query: 181 ggggaaggaaagaaaatagttgcagttgaagaggcagtcaggtaaggggcccaccaaagt 240
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 ggggaaggaaagaaattagttgcagttgaagaggcagtcaggtaaggggcccaccaaagt 373
Query: 241 ctactc----ttttgtcttactctgaaataactggaggaattaaacaggactgagatctg 296
|||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 ctactccagg----gccttactctgaaataactggaggaattaaacaggactgagatctg 317
Query: 297 tgtggtcagcagtctagggagttgatgaggacttgccctggggagagacgaggttagctg 356
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 316 tgtggtcagcagtctagggagttgatgaggacttgccctggggagagacaaggttagctg 257
Query: 357 gaaa-agtagtttgaggagaacatggttatcacagcaagatttatattacaattgcgttt 415
|||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 gaaaca-tagtttgaggagaacatggttatcacagcaagatttatattacaattgcgttt 198
Query: 416 taaaaataaatttatattttaatataaacacaaagatcatcctttaaaagaaacgaagta 475
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 197 taaaaataaatttatattttaatataaacacaaaggtcatcctttaaaagaaacgaagta 138
Query: 476 atttgcagaaaccagaatgaaaagatcatatg 507
||||||||||||||||||||||||||||||||
Sbjct: 137 atttgcagaaaccagaatgaaaagatcatatg 106
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 507
Length of database: 907
Length adjustment: 10
Effective length of query: 497
Effective length of database: 897
Effective search space: 445809
Effective search space used: 445809
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
