Query= MSMg01no446_h12.b1 MSMg01no446_h12.b1 CHROMAT_FILE:
MSMg01no446_h12.b1 PHD_FILE: MSMg01no446_h12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:15:00 2005
(536 letters)
>mm_chr2_62898112_62899046
Length = 935
Score = 930 bits (481), Expect = 0.0
Identities = 520/533 (97%), Gaps = 5/533 (0%)
Strand = Plus / Minus
Query: 5 gaattctcttaat-tttctaactataaacttaacttgtatatgctttgtcctaatctttt 63
||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct: 734 gaattctcttaatgttt-taactataaacttaacttgtatatgctttgtcctaatc-ttt 677
Query: 64 tc-agcatttcacagattttccaaatctatgctgtaggctctgccaaactagcagttaag 122
|| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 tcaagcatatcacagattttccaaatctatgctgtaggctctgccaaactagcagttaag 617
Query: 123 agaaacaaaggctctgcccaatgagtccagaatgaaatgaaggtgatgacaatgtataga 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 agaaacaaaggctctgcccaatgagtccagaatgaaatgaaggtgatgacaatgtataga 557
Query: 183 ataaataagaaagtactataatacatttgaaatcaacatgagttaagaaaaataggaggt 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 ataaataagaaagtactataatacatttgaaatcaacatgagttaagaaaaataggaggt 497
Query: 243 acaaaggatatgaagaagtgggcagaaaaatgctttttttagtagggaagagagaaagtg 302
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 496 acaaaggatatgaagaagtgggcagaaaaatgcagtttttagtagggaagagagaaagtg 437
Query: 303 agccgctgagaagtaacttttgtggacagttttgatgaaaagagaagggcaagtctcaac 362
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 436 agccgctgagaagtaacttttgtggacagttttgatgaaaagaaaagggcaagtctcaac 377
Query: 363 tcgcatcgctgcatggagaaaactggtgaagagcctctgagcatggggagcatgcacatg 422
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 tcgcatcgctgcatggagaaaactggtgaagagcctctgagcatggggagcatgcacat- 318
Query: 423 gttattgaaaacctcacaggaatatcaacctgtccagatatagtaggtgaggacctgcag 482
|||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 317 gttatttaaaacctcacaggaatatcaacctgtccagacatagtaggtgaggacctgcag 258
Query: 483 cataaaagatagcaatataaaatgatgtcgcatgcctacttcctctctattca 535
|||||||||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct: 257 cataaaagatagcagtataaaatgatgtcacatgcctacttcctctctattca 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 536
Length of database: 935
Length adjustment: 10
Effective length of query: 526
Effective length of database: 925
Effective search space: 486550
Effective search space used: 486550
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no446_h12.g1 MSMg01no446_h12.g1 CHROMAT_FILE:
MSMg01no446_h12.g1 PHD_FILE: MSMg01no446_h12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:15:00 2005
(241 letters)
>mm_chr2_62698093_62698733
Length = 641
Score = 458 bits (237), Expect = e-133
Identities = 240/241 (99%)
Strand = Plus / Plus
Query: 1 tgtatcaaaattgcagcttctcatcattgaattaaagaatgactttcagctccagtggag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgtatcaaaattgcagcttctcatcattgaattaaagaatgactttcagctccagtggag 260
Query: 61 actagtaaaagtatggtggaggcctttctgcaaatgaaacacatggaacatttctttgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 261 actagtaaaagtatggtggaggcctttctgcaaatgaaacacatggaacatttttttgtt 320
Query: 121 tcatacttgcttggggttagaaaaaaaagacacaaacctgaggaggtaatatagctgttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcatacttgcttggggttagaaaaaaaagacacaaacctgaggaggtaatatagctgttg 380
Query: 181 agactaatgtatgctttatgtgttaattatattgagtgagtccaaaacatgaatatggtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agactaatgtatgctttatgtgttaattatattgagtgagtccaaaacatgaatatggtt 440
Query: 241 t 241
|
Sbjct: 441 t 441
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 241
Length of database: 641
Length adjustment: 9
Effective length of query: 232
Effective length of database: 632
Effective search space: 146624
Effective search space used: 146624
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
