Query= MSMg01no446_l11.b1 MSMg01no446_l11.b1 CHROMAT_FILE:
MSMg01no446_l11.b1 PHD_FILE: MSMg01no446_l11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:15:19 2005
(264 letters)
>mm_chr2_119751827_119752490
Length = 664
Score = 449 bits (232), Expect = e-130
Identities = 255/263 (96%)
Strand = Plus / Plus
Query: 1 atcagaaggtagatgagtatgtgactcttaagttggccgtagtattgggatgatttagta 60
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 201 atcagaaggtagatgagtatgtgactcttaagttggtggtagtattgggatgatttagta 260
Query: 61 aaattttaatgttctcctttaactttaggcatctctcaaaactaaacctatccacacaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaattttaatgttctcctttaactttaggcatctctcaaaactaaacctatccacacaat 320
Query: 121 cataaggaaacgagctcctccatgcaacaatgacttctgtcgccttttttgtgtgtgctc 180
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 321 cataaggaaacgagctcctccatgcaacaatgacttctgtcgcctgggttgtgtgtgctc 380
Query: 181 tagtctagctttggaaaagcgccaacctgctcactgccgtcgaccagactgtaggtttgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||
Sbjct: 381 tagtctagctttggaaaagcgccaacctgctcactgccgtcgaccagactgcatgtttgg 440
Query: 241 ttgcacttgnttgaaaagaaaag 263
||||||||| |||||||||||||
Sbjct: 441 ttgcacttgtttgaaaagaaaag 463
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 264
Length of database: 664
Length adjustment: 9
Effective length of query: 255
Effective length of database: 655
Effective search space: 167025
Effective search space used: 167025
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no446_l11.g1 MSMg01no446_l11.g1 CHROMAT_FILE:
MSMg01no446_l11.g1 PHD_FILE: MSMg01no446_l11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:15:19 2005
(197 letters)
>mm_chr2_119919328_119919923
Length = 596
Score = 337 bits (174), Expect = 4e-97
Identities = 189/194 (97%), Gaps = 1/194 (0%)
Strand = Plus / Minus
Query: 1 tttgccagacacaggtaccctgtgtgctcaagactgattagtcagtccccaaggatggga 60
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 393 tttgccagacacaggtaccctgtgtgctcaagactga-gagtcagtccccaaggatggga 335
Query: 61 taggtgtccctgcacccagggtaattcagactccttacccaggcactttggaatgtttgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 taggtgtccctgcacccagggtaattcagactccttacccaggcactttggaatgtttgt 275
Query: 121 gtaggaagtttctctatccctcctcagcagctgactcattcgccctcgctgtgacactgt 180
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 gtaggaaggccctctatccctcctcagcagctgactcattcgccctcgctgtgacactgt 215
Query: 181 cagcagaagggctg 194
||||||||||||||
Sbjct: 214 cagcagaagggctg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 197
Length of database: 596
Length adjustment: 8
Effective length of query: 189
Effective length of database: 588
Effective search space: 111132
Effective search space used: 111132
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
