Query= MSMg01no446_m13.b1 MSMg01no446_m13.b1 CHROMAT_FILE:
MSMg01no446_m13.b1 PHD_FILE: MSMg01no446_m13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:15:25 2005
(358 letters)
>mm_chr2_73216936_73217694
Length = 759
Score = 627 bits (324), Expect = 0.0
Identities = 348/356 (97%), Gaps = 1/356 (0%)
Strand = Plus / Plus
Query: 4 ggaattcctaggagatgccgtaaagcaaagcaaaagaaaggtctctcttctctactcacc 63
||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcctaggagaggttgtaaagcaaagcaaaagaaaggtctctcttctctactcacc 263
Query: 64 atgaacagaggg-aaggcagatggacacagacgctattaacaaatgccccattagggagc 122
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 atgaacagaggggaaggcagatggacacagacgctattaacaaatgccccattagggagc 323
Query: 123 agacatttagaataatgttctgtagcacatcttccatttcacaggcagatgagaaagctg 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 agacatttagaataatgttctgtagcacatcttccatttcacaggcagatgagaaagctg 383
Query: 183 cctatatgactggcttttaataaagcgatgctccacagcctggtgttacaagagttctta 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 cctatatgactggcttttaataaagcgatgctccacagcctggtgttacaagagttctta 443
Query: 243 cccatgagtgccaccaacagcaaaacttctcatccctttttgaccaacacactcatcacg 302
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 444 cccatgagtgccaccaacagcaaaacttctcatcccaaattgaccaacacactcatcacg 503
Query: 303 gcaattagggttgctatgctgctaggaacctgatcattaccaatttactgacagaa 358
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gcaattaaggttgctatgctgctaggaacctgatcattaccaatttactgacagaa 559
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 358
Length of database: 759
Length adjustment: 9
Effective length of query: 349
Effective length of database: 750
Effective search space: 261750
Effective search space used: 261750
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no446_m13.g1 MSMg01no446_m13.g1 CHROMAT_FILE:
MSMg01no446_m13.g1 PHD_FILE: MSMg01no446_m13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:15:25 2005
(457 letters)
>mm_chr2_73414333_73415189
Length = 857
Score = 847 bits (438), Expect = 0.0
Identities = 452/457 (98%)
Strand = Plus / Minus
Query: 1 ttccttggagtctcgtanaattctattacatcggcttgcttactcattctttcactgatg 60
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 ttccttggagtctcgtaaaattctattacatcggcttgcttactcattctttcactgatg 598
Query: 61 gtcctatgggctgcttcctggcaatggactacagtaatgtttctataaaccctgtggagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 gtcctatgggctgcttcctggcaatggactacagtaatgtttctataaaccctgtggagg 538
Query: 121 gaaactgtatctcctcaccttgcccattgaagccactctaagaagtagagattgaggtgg 180
|||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 537 gaaactgtatctcctcaccttgcctattgaagccactctaaggagtagagattgaggtgg 478
Query: 181 aaatttctcacaaagggcatgggcaagggtaggaggtgagtgtctccagcatgctggcat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 aaatttctcacaaagggcatgggcaagggtaggaggtgagtgtctccagcatgctggcat 418
Query: 241 gcccattccctcagtcctcctctcttggtgaatcattaggctacatgaatagcttttctg 300
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 gcccattcccccagtcctcctctcttggtgaatcattaggctacatgaatagcttttctg 358
Query: 301 ggacacactgctgaccctcttgctttctagtgtgttcctcctgtgcaaaatctgggtctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 ggacacactgctgaccctcttgctttctagtgtgttcctcctgtgcaaaatctgggtctt 298
Query: 361 tgcacaacacccccttttgagagtcatcagctggcctgcaatttgggggaagttctatga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 tgcacaacacccccttttgagagtcatcagctggcctgcaatttgggggaagttctatga 238
Query: 421 gaaagctctttgatactcttggaaattttgtgtttta 457
||||| |||||||||||||||||||||||||||||||
Sbjct: 237 gaaagttctttgatactcttggaaattttgtgtttta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 457
Length of database: 857
Length adjustment: 10
Effective length of query: 447
Effective length of database: 847
Effective search space: 378609
Effective search space used: 378609
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
