Query= MSMg01no447_p16.b1 MSMg01no447_p16.b1 CHROMAT_FILE:
MSMg01no447_p16.b1 PHD_FILE: MSMg01no447_p16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:17:04 2005
(548 letters)
>mm_chr2_83864269_83865216
Length = 948
Score = 1013 bits (524), Expect = 0.0
Identities = 537/544 (98%), Gaps = 5/544 (0%)
Strand = Plus / Plus
Query: 5 gaattccaggcatatacgtgctccaaacaaaacaaaacaaaacaaaacaaaacaaaacaa 64
|||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 gaattccaggcatagaagtgctccaaacaaaacaaaacaaaacaaaacaaaacaaaacaa 269
Query: 65 aacaaaacaaaacaaaacaaaacaaaacaaaaaacaaaacaagattgaggttgagagcta 124
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 270 aacaaaacaaaacaaaacaaaacaaaa-----aacaaaacaagattgaggttgagagcta 324
Query: 125 gggaggttgctcagttggtaaacgcttccttcacaagcatgaatcctaagtttggctctc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gggaggttgctcagttggtaaacgcttccttcacaagcatgaatcctaagtttggctctc 384
Query: 185 catctagcacccacacaatgtcagatatgagagtatgtgtctgcaatcctgctcttaggg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 catctagcacccacacaatgtcagatatgagagtatgtgtctgcaatcctgctcttaggg 444
Query: 245 tttggaatggagggagccacaagggtcaatgtagccctctggttagtcagcttagctcta 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tttggaatggagggagccacaagggtcaatgtagccctctggttagtcagcttagctcta 504
Query: 305 tccatgaacaacaggtccagtgagagaccttatctcaaaaagtaaatcggataacaatca 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tccatgaacaacaggtccagtgagagaccttatctcaaaaagtaaatcggataacaatca 564
Query: 365 aggaatacactttatgttggcttccggtcaccacgtgcacatgcacacacatgcatttag 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 aggaatacactttatgttggcttccggtcaccacgtgcacatgcacacacatgcatttag 624
Query: 425 accccccacagaagtgcacacacccgcataagcacatatgtataatgcaaacaaacacaa 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 accccccacagaagtgcacacacccgcataagcacatatgtataatgcaaacaaacacaa 684
Query: 485 tacttttggaaaaaaatcactcgtatcctcctcccagatctctgaatgcataaatgttct 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tacttttggaaaaaaatcactcgtatcctcctcccagatctctgaatgcataaatgttct 744
Query: 545 gtaa 548
||||
Sbjct: 745 gtaa 748
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 63
Number of extensions: 16
Number of successful extensions: 16
Number of sequences better than 10.0: 1
Number of HSP's gapped: 13
Number of HSP's successfully gapped: 1
Length of query: 548
Length of database: 948
Length adjustment: 10
Effective length of query: 538
Effective length of database: 938
Effective search space: 504644
Effective search space used: 504644
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no447_p16.g1 MSMg01no447_p16.g1 CHROMAT_FILE:
MSMg01no447_p16.g1 PHD_FILE: MSMg01no447_p16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:17:04 2005
(464 letters)
>mm_chr2_84073148_84074011
Length = 864
Score = 745 bits (385), Expect = 0.0
Identities = 394/397 (99%)
Strand = Plus / Minus
Query: 68 ccttgatcatgtaattaaaacgttatttttagttgtgtgtatgggtgcccttgatgcagg 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 864 ccttgatcatgtaattaaaacgttatttttagttgtgtgtatgggtgcccttgatgcagg 805
Query: 128 tgcccatggaggctggaggcatctgatcccccagggctggaatacatgcagctgtgaagc 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 tgcccatggaggctggaggcatctgatcccccagggctggaatacatgcagctgtgaagc 745
Query: 188 aactgacatgaggactaggagccaaactcagatccttttgcaagagctgtccacgctcat 247
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 aactgacatgaggactaggagccaaactcagatccttttgcaagagctgtccacgctcac 685
Query: 248 ctcactcagccgccacttcacacccacttgtggagcatcgaattttctttgtgtgttatt 307
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 cccactcagccgccacttcacacccacttgtggagcatcgaattttctttgtgtgttatt 625
Query: 308 gttaagacacactcgttatcactcatggttaattgaaatgaaaaagtaatttcaaattaa 367
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 gttaagacacacacgttatcactcatggttaattgaaatgaaaaagtaatttcaaattaa 565
Query: 368 caactgacataaattcatttattcgtataagtttccctcatcttagtcattatcacagtt 427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 caactgacataaattcatttattcgtataagtttccctcatcttagtcattatcacagtt 505
Query: 428 ctcatggtcataatgatgaattaataccacttatttg 464
|||||||||||||||||||||||||||||||||||||
Sbjct: 504 ctcatggtcataatgatgaattaataccacttatttg 468
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 464
Length of database: 864
Length adjustment: 10
Effective length of query: 454
Effective length of database: 854
Effective search space: 387716
Effective search space used: 387716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
