Query= MSMg01no448_c14.b1 MSMg01no448_c14.b1 CHROMAT_FILE:
MSMg01no448_c14.b1 PHD_FILE: MSMg01no448_c14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:17:19 2005
(456 letters)
>mm_chr2_168278958_168279810
Length = 853
Score = 700 bits (362), Expect = 0.0
Identities = 427/456 (93%), Gaps = 13/456 (2%)
Strand = Plus / Plus
Query: 1 caacatggatgaacgtgtgcctgggtgaatgtctctgtccccggggaccaggcagcttgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caacatggatgaacgtgtgcctgggtgaatgtctctgtccccggggaccaggcagcttgg 260
Query: 61 gcagggccactctggagtaaatatcagccctatgagctttaagctggccaagccagggta 120
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 261 gcagggccactctggagtaaatatcagccctgtgagctttaagctggccaagccagggta 320
Query: 121 ggcacctgcctctttgacttctaaccctttccagcacaacctgctaggcctgtctcgcct 180
||||||||||||||| ||||||||||||| || ||||||||||||| |||||||||||||
Sbjct: 321 ggcacctgcctctttaacttctaacccttcccggcacaacctgctatgcctgtctcgcct 380
Query: 181 tgcatggtggaacattctggaagtgctatgagcgtgagttcgtgttcagagttgttgccc 240
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 381 tgcatggtggaacattctggaagtggtatgagcgtgagttcgtgttcagagttgttgccc 440
Query: 241 tctccttgctcttcctgtgatggtgaagtcgcagcagcagcagcagctactccacaggac 300
|||||||| ||||||||||||||||||||||||||||||||||| | |||||||| ||
Sbjct: 441 tctccttggtcttcctgtgatggtgaagtcgcagcagcagcagc---tcctccacagaac 497
Query: 301 gtcgtccttgtggctcacactccattcatctcctatcatctcccccagagcttgtgtcac 360
|||||||||||||||||||||||||||||||| ||||||||||||||| |
Sbjct: 498 atcgtccttgtggctcacactccattcatctcc----------cccagagcttgtgtcgc 547
Query: 361 gtcgacaaacaaaacaaagcaaaacaaaacaaaacacccaacaaggacaatcatgatggc 420
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 548 gtcgacaaacaaaacaaagcaaaacaaaacaaaaaacccaacaaggacaatcatgatggc 607
Query: 421 cagtttccacgctgggtttggccaccctacctccta 456
||||||||||||||| ||| ||| |||||||||||
Sbjct: 608 cagtttccacgctggacttgtccatcctacctccta 643
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 456
Length of database: 853
Length adjustment: 10
Effective length of query: 446
Effective length of database: 843
Effective search space: 375978
Effective search space used: 375978
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no448_c14.g1 MSMg01no448_c14.g1 CHROMAT_FILE:
MSMg01no448_c14.g1 PHD_FILE: MSMg01no448_c14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:17:20 2005
(488 letters)
>mm_chr2_168463458_168464345
Length = 888
Score = 801 bits (414), Expect = 0.0
Identities = 434/444 (97%), Gaps = 9/444 (2%)
Strand = Plus / Minus
Query: 1 tctctgtgtgtttcatagcacagtcctgtttttgtgccccagtctctctgtttcgaggcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tctctgtgtgtttcatagcacagtcctgtttttgtgccccagtctctctgtttcgaggcg 385
Query: 61 gacacatgtaacttactagtgaacatgagtgctggcttatgtccttcctgtttttaaccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gacacatgtaacttactagtgaacatgagtgctggcttatgtccttcctgtttttaaccc 325
Query: 121 ctgtgggtgacatactcaaaagtgttcagagcccagaactttgaaggggatgaggcggtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ctgtgggtgacatactcaaaagtgttcagagcccagaactttgaaggggatgaggcggtt 265
Query: 181 ggtgagacatttctttggcatttgaagctgtgtcagagcataaggcatgcatcggtcgaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ggtgagacatttctttggcatttgaagctgtgtcagagcataaggcatgcatcggtcgaa 205
Query: 241 agac--at----t-t--ttcatcctctctcctgcctcctgcatcctcaccgtgtttgtaa 291
|||| || | | | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 agactgatcctctctcctccatcctctctcctgcctcctgcatcctcaccgtgtttgtaa 145
Query: 292 aggcagtcacaggctgggttgcagttcccttgcagagtgcatgtctagcacaaagagagt 351
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 aggcagtcacaggctgggttgcagttcccttgcagagtgcatgtctagcacaaagagagt 85
Query: 352 cctggatttgatccccagcaccacgtgagcacggtgtggcagctcacacctgacatctca 411
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84 cctggatttgatccccagcaccacgtgagcacggtgtggcagctcacacctgacatctca 25
Query: 412 gcacaagggaggcggaggcaggag 435
||||||||||||||||||||||||
Sbjct: 24 gcacaagggaggcggaggcaggag 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 488
Length of database: 888
Length adjustment: 10
Effective length of query: 478
Effective length of database: 878
Effective search space: 419684
Effective search space used: 419684
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
