TTTATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCTTCATCTTTAGCAGAAAGAAGTCAGGATAGCTAAATGTG
GGCCTTTGTTAGGCTCAGGGCATCTGCTGAATTGCTACGATCGTCCTAAG
ACCCACATGGGCTCATTCATTGTTTTATTTGAGTTCAGCGAATTCCTGCT
ATTGGGACCAAAATAAGAGGCCATGAAAGCCCTGAAATCCAGGGAAAGAT
TTAACCAAAGCCCCTGGGGAGAAGGGGACAGCTGGACAATGTGTAGTGAT
TTCGAGTAGTGTCAATTGTAGACACATGTCCTTTCACACTGTGACCCTTG
ATGATAGACCAAAACAGGTGTCATTGTGAAAAAGACTGAGTGTTGCTTGG
GTCACCAGCCACCCGCCTTACCAGTCTCCTGCCTCAGCAGCCACCCGCTT
TGGAGCACCCTCCATTTCTTCAGGGTGAGATGGAAGAGATTTCCTTGCTG
TAGGTTTCCCTGGCTGGGCACATTCTGGCCACCGTCCAGATATTTATTGA
ATAGTGTGCTTAGAGAAGGAATTGGAGGAGTTCTCCTAAAAAGGCTCAGC
TAATAAATATTTCAGGCTTGCCGTCTGTATGGTCCCGGCTGTAACTACTC
AGTCCTAAACGCTTCAGAAATTTCATTCTGATAGGACAATCCTGCCCTGT
CTGCAGCCCGTTTCCCCCACCCCGTCAGAGTGAACTTGN

NCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGAACAAAGTGAGAAA
GCATAGAGAAACAAGCTGCTTGCTGGCTTCTCCACAGGCTTGTGCTTAGC
TAGATTTCTCACACAGTCCAGGACTTGGAAGTGTACTGTTCACAGTGAGC
TGCTGCTCCTGCATCAATTAATCATCAAGACAATCCCCACCGATATTTCT
ACAGATGCTCTGGTCAAGAAGATTCCTTAATGGAGACAAGTCCAGGCTGT
GTCAAGTTTACCGTTAAAGCTAACTAGAACACTGAGTATCCACTACTTGC
TGAGTGACTAAGATGATGGAATGGTTTTGTTTTGTTTTATATGAAGATTT
ATTATAGAACTAAAGGAAATTAAGATTGCAATATATCCAAAGTATTTAAA
TATTGTTTTTCAAGGGCAGTTTTAACTATCAGAAGTTTTAAATGTCCTCT
CTCTAATATCCTGCCAGGGACTGCTATTCACCTTCTAGTAAGCACATATC
GCTTTACCCCTTAAAAAAAAAAAGGTTGGCTGGAACCCCATTTTGCCTAA
AAGACCTTCCTTTTCCTTTATGGGCAATTTTTTTTCCCTTATATATAGAA
AAAAAATTGTTGTAAAATTAACCTTCTCCTACTCTTTATTAAAAAAAATA
CACTAGCTTTTTTCTACAGCTCTTTTTTTCCCCTCGTTTCTTTCTTTTTT
CCCCCCCTTTTTTTCCGCTCTTCTCTCATTC

Query= MSMg01no448_f24.b1 MSMg01no448_f24.b1 CHROMAT_FILE:
MSMg01no448_f24.b1 PHD_FILE: MSMg01no448_f24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:17:38 2005
         (502 letters)



>mm_chr2_117764067_117764968
          Length = 902

 Score =  969 bits (501), Expect = 0.0
 Identities = 501/501 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   gtcaggatagctaaatgtgggcctttgttaggctcagggcatctgctgaattgctacgat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 gtcaggatagctaaatgtgggcctttgttaggctcagggcatctgctgaattgctacgat 642

                                                                       
Query: 61  cgtcctaagacccacatgggctcattcattgttttatttgagttcagcgaattcctgcta 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 cgtcctaagacccacatgggctcattcattgttttatttgagttcagcgaattcctgcta 582

                                                                       
Query: 121 ttgggaccaaaataagaggccatgaaagccctgaaatccagggaaagatttaaccaaagc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 ttgggaccaaaataagaggccatgaaagccctgaaatccagggaaagatttaaccaaagc 522

                                                                       
Query: 181 ccctggggagaaggggacagctggacaatgtgtagtgatttcgagtagtgtcaattgtag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 ccctggggagaaggggacagctggacaatgtgtagtgatttcgagtagtgtcaattgtag 462

                                                                       
Query: 241 acacatgtcctttcacactgtgacccttgatgatagaccaaaacaggtgtcattgtgaaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 acacatgtcctttcacactgtgacccttgatgatagaccaaaacaggtgtcattgtgaaa 402

                                                                       
Query: 301 aagactgagtgttgcttgggtcaccagccacccgccttaccagtctcctgcctcagcagc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 aagactgagtgttgcttgggtcaccagccacccgccttaccagtctcctgcctcagcagc 342

                                                                       
Query: 361 cacccgctttggagcaccctccatttcttcagggtgagatggaagagatttccttgctgt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 cacccgctttggagcaccctccatttcttcagggtgagatggaagagatttccttgctgt 282

                                                                       
Query: 421 aggtttccctggctgggcacattctggccaccgtccagatatttattgaatagtgtgctt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 aggtttccctggctgggcacattctggccaccgtccagatatttattgaatagtgtgctt 222

                                
Query: 481 agagaaggaattggaggagtt 501
           |||||||||||||||||||||
Sbjct: 221 agagaaggaattggaggagtt 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 502
Length of database: 902
Length adjustment: 10
Effective length of query: 492
Effective length of database: 892
Effective search space:   438864
Effective search space used:   438864
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no448_f24.g1 MSMg01no448_f24.g1 CHROMAT_FILE:
MSMg01no448_f24.g1 PHD_FILE: MSMg01no448_f24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:17:38 2005
         (382 letters)



>mm_chr2_117611766_117612547
          Length = 782

 Score =  731 bits (378), Expect = 0.0
 Identities = 381/382 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   aggaacaaagtgagaaagcatagagaaacaagctgcttgctggcttctccacaggcttgt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aggaacaaagtgagaaagcatagagaaacaagctgcttgctggcttctccacaggcttgt 260

                                                                       
Query: 61  gcttagctagatttctcacacagtccaggacttggaagtgtactgttcacagtgagctgc 120
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcttagctagatttcttacacagtccaggacttggaagtgtactgttcacagtgagctgc 320

                                                                       
Query: 121 tgctcctgcatcaattaatcatcaagacaatccccaccgatatttctacagatgctctgg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgctcctgcatcaattaatcatcaagacaatccccaccgatatttctacagatgctctgg 380

                                                                       
Query: 181 tcaagaagattccttaatggagacaagtccaggctgtgtcaagtttaccgttaaagctaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcaagaagattccttaatggagacaagtccaggctgtgtcaagtttaccgttaaagctaa 440

                                                                       
Query: 241 ctagaacactgagtatccactacttgctgagtgactaagatgatggaatggttttgtttt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctagaacactgagtatccactacttgctgagtgactaagatgatggaatggttttgtttt 500

                                                                       
Query: 301 gttttatatgaagatttattatagaactaaaggaaattaagattgcaatatatccaaagt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gttttatatgaagatttattatagaactaaaggaaattaagattgcaatatatccaaagt 560

                                 
Query: 361 atttaaatattgtttttcaagg 382
           ||||||||||||||||||||||
Sbjct: 561 atttaaatattgtttttcaagg 582


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 382
Length of database: 782
Length adjustment: 9
Effective length of query: 373
Effective length of database: 773
Effective search space:   288329
Effective search space used:   288329
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)