Query= MSMg01no448_i21.b1 MSMg01no448_i21.b1 CHROMAT_FILE:
MSMg01no448_i21.b1 PHD_FILE: MSMg01no448_i21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:17:52 2005
(384 letters)
>mm_chr2_40670630_40671413
Length = 784
Score = 681 bits (352), Expect = 0.0
Identities = 364/368 (98%)
Strand = Plus / Minus
Query: 8 gaattctttgagctataacctgtaaatgctcatttactctttgagactagggacatttct 67
||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 gaattctttgagctagaagttgtaaatgctcatttactctttgagactagggacatttct 516
Query: 68 gtgttttcctgtttgatacacaaagtatcaatcatccttggattctatctcttgcttact 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 gtgttttcctgtttgatacacaaagtatcaatcatccttggattctatctcttgcttact 456
Query: 128 ttctttaaggaaattaacagagaacactccccttctctcatttatttcccttagctaccc 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 ttctttaaggaaattaacagagaacactccccttctctcatttatttcccttagctaccc 396
Query: 188 tacttcttatagtgactccaaatgactggtgattaccgccaatcaaataattaattcatc 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 tacttcttatagtgactccaaatgactggtgattaccgccaatcaaataattaattcatc 336
Query: 248 atcatgtacaacataacaattcatagttcactatatagtctaccatgatgtgtcttgagt 307
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 335 atcatgtacaacataacaattcatagttcactatatagtctaccatgatgtatcttgagt 276
Query: 308 gaggagatcataaatagcatccattcctctcaaacttgaatgctgctgtggggtgggagt 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 gaggagatcataaatagcatccattcctctcaaacttgaatgctgctgtggggtgggagt 216
Query: 368 gggggtgg 375
||||||||
Sbjct: 215 gggggtgg 208
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 384
Length of database: 784
Length adjustment: 9
Effective length of query: 375
Effective length of database: 775
Effective search space: 290625
Effective search space used: 290625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no448_i21.g1 MSMg01no448_i21.g1 CHROMAT_FILE:
MSMg01no448_i21.g1 PHD_FILE: MSMg01no448_i21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:17:52 2005
(445 letters)
>mm_chr2_40615057_40615897
Length = 841
Score = 841 bits (435), Expect = 0.0
Identities = 441/445 (99%), Gaps = 4/445 (0%)
Strand = Plus / Plus
Query: 1 tatctctgtccattcaactaggtaacagacagataagtttgcctacatttttccaaaact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tatctctgtccattcaactaggtaacagacagataagtttgcctacatttttccaaaact 260
Query: 61 tattttgtgttctttgaaaaccacagcaaatacacttgaggtaattaaaaagcgagccta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tattttgtgttctttgaaaaccacagcaaatacacttgaggtaattaaaaagcgagccta 320
Query: 121 tatttttaaatgatgagttgattgcaactatatagagtgtctacctctgagagtcaaaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tatttttaaatgatgagttgattgcaactatatagagtgtctacctctgagagtcaaaag 380
Query: 181 cactgaatgagttcacactttctgatgaacagattctaattggaatcagaaggaagcagc 240
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cactga----gttcacactttctgatgaacagattctaattggaatcagaaggaagcagc 436
Query: 241 aaaggagagtagaagcaactggaaatgaaaaacttgactggaatctttcccatgtgtagc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 aaaggagagtagaagcaactggaaatgaaaaacttgactggaatctttcccatgtgtagc 496
Query: 301 atactggcagaatatatgcattaatgttttctgactaattttattcatctactctaactt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 atactggcagaatatatgcattaatgttttctgactaattttattcatctactctaactt 556
Query: 361 gaaaacagtaaatatataccacattgaacttacagtctgtcttaagtgtgagctcattat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 gaaaacagtaaatatataccacattgaacttacagtctgtcttaagtgtgagctcattat 616
Query: 421 tactgagcaatagtaataaggaaga 445
|||||||||||||||||||||||||
Sbjct: 617 tactgagcaatagtaataaggaaga 641
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 445
Length of database: 841
Length adjustment: 10
Effective length of query: 435
Effective length of database: 831
Effective search space: 361485
Effective search space used: 361485
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
