Query= MSMg01no448_k05.b1 MSMg01no448_k05.b1 CHROMAT_FILE:
MSMg01no448_k05.b1 PHD_FILE: MSMg01no448_k05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:17:59 2005
(270 letters)
>mm_chr2_160668619_160669288
Length = 670
Score = 478 bits (247), Expect = e-139
Identities = 262/267 (98%), Gaps = 2/267 (0%)
Strand = Plus / Minus
Query: 5 gaattcttgcccttac-gcttttggtgatgaactgttatatggaactatgagtgaaataa 63
|||||||||||| ||| ||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 601 gaattcttgcccatactgcttttggtgatgaactgttatatggaactacgagtgaaataa 542
Query: 64 tgccttccctcttc-agttgcttttggtcattgtgtttcatcacagcaatagtaatgacc 122
|||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tgcctttcctcttcaagttgcttttggtcattgtgtttcatcacagcaatagtaatgacc 482
Query: 123 ctaactaggacaattccaaaggtgtcagtcatggttgtcagactccacatatctggcatg 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ctaactaggacaattccaaaggtgtcagtcatggttgtcagactccacatatctggcatg 422
Query: 183 gcaccatgctctcagtgtgtcaaaaagacagttctttacttgttggtaggtggaaagcac 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gcaccatgctctcagtgtgtcaaaaagacagttctttacttgttggtaggtggaaagcac 362
Query: 243 aaagaggggaaaatacaggaagagttc 269
|||||||||||||||||||||||||||
Sbjct: 361 aaagaggggaaaatacaggaagagttc 335
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 270
Length of database: 670
Length adjustment: 9
Effective length of query: 261
Effective length of database: 661
Effective search space: 172521
Effective search space used: 172521
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no448_k05.g1 MSMg01no448_k05.g1 CHROMAT_FILE:
MSMg01no448_k05.g1 PHD_FILE: MSMg01no448_k05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:17:59 2005
(308 letters)
>mm_chr2_160523262_160523968
Length = 707
Score = 542 bits (280), Expect = e-158
Identities = 301/308 (97%), Gaps = 1/308 (0%)
Strand = Plus / Plus
Query: 1 cacactctggaactgaaggcatccagtctggttgtgctttgaattttcaaatagggctgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cacactctggaactgaaggcatccagtctggttgtgctttgaattttcaaatagggctgc 260
Query: 61 tttcttctaaactctcacctgcatgtgccatcagtttagtaatgcctcttttgcatgtac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttcttctaaactctcacctgcatgtgccatcagtttagtaatgcctcttttgcatgtac 320
Query: 121 cactgtggcatattttatatataaatagttttatatgggttttttgagtgatggatggtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cactgtggcatattttatatataaatagttttatatgggttttttgagtgatggatggtc 380
Query: 181 ttttaatacttagtatctctaaattgaaactgttgaaatgaaatttttttaaattaccat 240
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 381 ttttaatacttagtatctctaaattgaaactgttgaaatgaaatttttttaa-ttaccat 439
Query: 241 attttttctgtttgcttgacattgctgctcttttcagtgagacactttctttgaatgggc 300
||| |||| |||||||||| ||||||||||||||||||||||||| ||||||||||||
Sbjct: 440 attctttcagtttgcttgaaattgctgctcttttcagtgagacacagcctttgaatgggc 499
Query: 301 accacaaa 308
||||||||
Sbjct: 500 accacaaa 507
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 308
Length of database: 707
Length adjustment: 9
Effective length of query: 299
Effective length of database: 698
Effective search space: 208702
Effective search space used: 208702
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
