Query= MSMg01no448_l03.b1 MSMg01no448_l03.b1 CHROMAT_FILE:
MSMg01no448_l03.b1 PHD_FILE: MSMg01no448_l03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:18:03 2005
(234 letters)
>mm_chr2_64702326_64702959
Length = 634
Score = 406 bits (210), Expect = e-118
Identities = 228/234 (97%)
Strand = Plus / Minus
Query: 1 tgaaactccaaccaaaaaccaaataatcgaaaatcatgtctgtttttatgttgactgttg 60
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 434 tgaaactccaaccaaaaaccaaataatcaaaaatcatgtctgtttttatgttgactgttg 375
Query: 61 cttttatcctttgttatattgaaagaggaagtactccaaatcttcaaagcattattttcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 cttttatcctttgttatattgaaagaggaagtactccaaatcttcaaagcattattttcc 315
Query: 121 aaatgttggtcattaataacttaaagaactgtacaaggctttcttttttttgacaacatt 180
||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 314 aaatgttggtcattaataacttaaagaactgtacagggctttcttttgcttgacaacatt 255
Query: 181 aaaaacagagtctttacaccacagagaatgactcagtggataaagtattccctg 234
||||||||||||||||||||| ||||||||||||| ||||||||||||||||||
Sbjct: 254 aaaaacagagtctttacaccagagagaatgactcattggataaagtattccctg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 234
Length of database: 634
Length adjustment: 9
Effective length of query: 225
Effective length of database: 625
Effective search space: 140625
Effective search space used: 140625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no448_l03.g1 MSMg01no448_l03.g1 CHROMAT_FILE:
MSMg01no448_l03.g1 PHD_FILE: MSMg01no448_l03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:18:03 2005
(242 letters)
>mm_chr2_64579949_64580590
Length = 642
Score = 408 bits (211), Expect = e-118
Identities = 235/243 (96%), Gaps = 2/243 (0%)
Strand = Plus / Plus
Query: 1 ttcagttaagccagccatttctgccaatggaactgttgtctagataggagaagattcatg 60
|||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 201 ttcagttaagccagccttttctgccaatggaactgttgtctagataggagaagagtcatg 260
Query: 61 gaactttatcctttccagttcatccataatacacctcaatgtttctagtggcttttgcca 120
| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggactttctcctttccagttcatccataatacacctcaatgtttctagtggcttttgcca 320
Query: 121 gccttatgttctttgtttatgtattt-cattgaatgtccctacaaggacaattaatatat 179
|||||||||||||||||||||||||| | |||||||||||||||||||||||||| | ||
Sbjct: 321 gccttatgttctttgtttatgtatttgc-ttgaatgtccctacaaggacaattaaaacat 379
Query: 180 tttcaaataaaaacaggctaatatcattcttcgcactcttcacttatctttttcttgttt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tttcaaataaaaacaggctaatatcattcttcgcactcttcacttatctttttcttgttt 439
Query: 240 ttt 242
|||
Sbjct: 440 ttt 442
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 242
Length of database: 642
Length adjustment: 9
Effective length of query: 233
Effective length of database: 633
Effective search space: 147489
Effective search space used: 147489
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
