Query= MSMg01no449_b09.b1 MSMg01no449_b09.b1 CHROMAT_FILE:
MSMg01no449_b09.b1 PHD_FILE: MSMg01no449_b09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:18:35 2005
(440 letters)
>mm_chr2_138141870_138142709
Length = 840
Score = 743 bits (384), Expect = 0.0
Identities = 424/442 (95%), Gaps = 11/442 (2%)
Strand = Plus / Plus
Query: 5 gaattcctggatttgttctgatcctcttagctgagtgactgctgaccagtgtcttgtcat 64
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctggatttgtcctgatcctcttagctgagtgactgctgaccagtgtcttgtcat 264
Query: 65 ctggagatatttgtcttttcacatacaaaatcatgtgaggttagtgtttgttcttaagaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ctggagatatttgtcttttcacatacaaaatcatgtgaggttagtgtttgttcttaagaa 324
Query: 125 aaaccttttggaactaggaatttcttctttgtgtaattttgttgttttgtattggtattg 184
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 325 aaaccttttggaactaggaatttcttctttgtgtgattttgttgttttgtattggtattg 384
Query: 185 gttttgtttcttgtttttgatacaggatcttgctatggcactcagattagtctggacctc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gttttgtttcttgtttttgatacaggatcttgctatggcactcagattagtctggacctc 444
Query: 245 ataaaactctcgcctcccaagtgctaggatcattgtttttt----ccttcccttacccag 300
||||||||||||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 445 ataaaactctcgcctcccaagtgctaggatcattggt----gcacccttcccttacccag 500
Query: 301 gttcacatgagattttatttattaaaaaaacaatatattttatattatatataatatatt 360
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 501 gttcacatgagattttatttattaaaaaa-caatatattttatattatatataatatatt 559
Query: 361 ttacataatatatcatatgtgtatatatgcaatatatacatatataattatatattgtgc 420
||||||||||||| |||| |||||||||||||||||||||||| |||||| |||||||||
Sbjct: 560 ttacataatatattatatatgtatatatgcaatatatacatatgtaattacatattgtgc 619
Query: 421 atatatat--tacagattatca 440
|||||||| ||||||||||||
Sbjct: 620 atatatatattacagattatca 641
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 440
Length of database: 840
Length adjustment: 9
Effective length of query: 431
Effective length of database: 831
Effective search space: 358161
Effective search space used: 358161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no449_b09.g1 MSMg01no449_b09.g1 CHROMAT_FILE:
MSMg01no449_b09.g1 PHD_FILE: MSMg01no449_b09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:18:36 2005
(249 letters)
>mm_chr2_138313251_138313899
Length = 649
Score = 480 bits (248), Expect = e-140
Identities = 248/248 (100%)
Strand = Plus / Minus
Query: 1 aattctcttttggtaatagcattgttccatctccaagcttggataggatgtgctttgttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 aattctcttttggtaatagcattgttccatctccaagcttggataggatgtgctttgttt 389
Query: 61 caaaatactgtctacttttctttggctccttgtttatatccaggagcctggtcattaatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 caaaatactgtctacttttctttggctccttgtttatatccaggagcctggtcattaatt 329
Query: 121 gccttataattgtgatttggggggcattctttctgactttatttttcttttcaggaaaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 gccttataattgtgatttggggggcattctttctgactttatttttcttttcaggaaaga 269
Query: 181 cgcttatcaccttttcaatattttaaatattttatgtcttgagctttgctgctatgagtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 cgcttatcaccttttcaatattttaaatattttatgtcttgagctttgctgctatgagtt 209
Query: 241 ctggcttg 248
||||||||
Sbjct: 208 ctggcttg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 649
Length adjustment: 9
Effective length of query: 240
Effective length of database: 640
Effective search space: 153600
Effective search space used: 153600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
