NNNNCCTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAGAGAAT
CCGCGGAATTCAGAATTTCTACCCTGTGGGAGAGGTCCTGACTGTGAGGG
AGTTCAGATGTGATTTAGCTGAAAAATGCCAATTAGTAAAAAGTGTGTGG
TGTGTATGTGTGTGTGCATGTGTGTGCATGCATGTAGACACATGCATGTA
ATATGTATGCAGGTATGTGGGGTTTTTTTGGCTGTGTGCATGTACATAAG
TGTGGAAGTCTGAGGTCAACCTTGGACGTTGTTCTTCAGGAAACTGTACA
CTTTGTTTTGGAAACAGTGTATCTCAGTGAGCTCTGAAGGTGAACAATGA
GGCCAAGAGAGCTGTCCAGCAAACTCTGGAGCGCCCCCAGTGGTGGGACT
ACAGGTGTGCATCACCATGCCCGTCTCTATGTGAAGGCCCAGAATCAAAC
TCAGGTGTCACAGTGGTGTGGCAAGCACTTTCCTGGCCAACCTTTTTCCC
TGGTCCCTAAAGAACATAACTCTTGATCTGCTGTCCTAGATACGCCTGCT
ATTGCTTGCCTGTCCTAAGACACACCCACCCAGTGATCCACAATTTGTTC
TTTCTCTAAACAGAGTCAGTTTTAGATAACCAGGTTGGCTCTTCTAAGAA
TGCGACCAANAAACAAAAACTGGTAATGAATGGTGGAAATGANAAAACCA
AAACGAAACCGGGTTGAAACCTTTAAACAAAAGGTGGGAAAAAATGGCCA
AAAATTTGAAAAAA

NNNNCCGATGAAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXACAGAAAATCCTGTGTGTGTATGTGTTTAGAGA
TAGCAACTGGGGCTTGGATAACCTATCACGAGGCTTGTCACTGAAGAAAA
TTTATTTTCCCTCTCTCCACAGCCATAGACTGCCTGTAGCTCTATATTTA
CTGGTGGGGCTTTGTTTAATTTCCCATTGGCATGCTGACTATAGGGTCAC
TATGTAGTTCATGTTTAGGCAACCATACTGTTGAGACTTCATGGGTACAG
CACTCATGTTATGTCTAGAAGACTCGGTCNATTGCCAGCTCCCTGGTCCT
CTCGATCTTAGGATCTTTCAGCCTCTTCTTTCACAGTGTTCCCTGAAACT
TGTGTGTAGGGGTTGTGTTGTAGATGTATCAGCTGGGACTGTACACCTCA
CGGTCACACATTTGCTGCATTTGAGCTGGTTGGGGATCTCTGAAGTAGTC
TCTGTCTGCTGCCAATGAGGCTTCCTTGATGAAGGGAAAGAGTTGCATTT
ACCTGTGGATATACAGATAAATGTTTAGAATACAGTTCGAAGGCTATATT
GAGTTAGAAAAAAGTCAGTAATATTGCAGTAATGAATCGTACAACCTCTT
AGATCTGTGAGCTTTTTTTTTTTTTTTGTTGAATGCTTNGAAAAATAAAC
ATTGAGTTCCCTTGTACTGAGAGGACCTTAATCCACTTCCATACCCGTTG
GTTTTCCG

Query= MSMg01no449_g19.b1 MSMg01no449_g19.b1 CHROMAT_FILE:
MSMg01no449_g19.b1 PHD_FILE: MSMg01no449_g19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:19:03 2005
         (564 letters)



>mm_chr2_105283889_105284852
          Length = 964

 Score =  911 bits (471), Expect = 0.0
 Identities = 553/615 (89%), Gaps = 57/615 (9%)
 Strand = Plus / Plus

                                                                       
Query: 6   gaattcagaatttcta-ccctgtgggagaggtcctgactgtgagggagttcagatgtgat 64
           |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 151 gaattcagaatttctagccc-gtgggagaggtcctgactgtgagggagttcagatgtgat 209

                                                                       
Query: 65  ttagctgaaaaatgccaat---------------------------------tagt---- 87
           |||||||||||||||||||                                 ||||    
Sbjct: 210 ttagctgaaaaatgccaatgattctcagtagattccccagggtgacaaaaattagtttct 269

                                                                       
Query: 88  ---------aaaaagtgtgtggtgtgtatgtgtgtgtgcatgtgtgtgcatgcatgtaga 138
                    |||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 270 tgcgtaagtaaaaagtgtgtggtgtgtatgtgtgtgtgcatgtgtgtgcgtgcatgtaga 329

                                                                       
Query: 139 cacatgcatgtaatatgtatgcaggtatgtggggttttttt---------ggctgtgtgc 189
           |||||||||||||||||||||||||||||||||||||||||         ||||||||||
Sbjct: 330 cacatgcatgtaatatgtatgcaggtatgtggggttttttttttttttttggctgtgtgc 389

                                                                       
Query: 190 atgtacataagtgtggaagtctgaggtcaaccttggacgttgttcttcaggaaactgtac 249
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 390 atgtacataagtgtggaagtctgaggtcaaccttggacgttgttcttcaggaaactgcac 449

                                                                       
Query: 250 actttgttttggaaacagtgtatctcagtgagctctgaaggtgaacaatgaggccaagag 309
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 actttgttttggaaacagtgtatctcagtgagctctgaaggtgaacaatgaggccaagag 509

                                                                       
Query: 310 agctgtccagcaaactctggagcgcccccagtggtgggactacaggtgtgcatcaccatg 369
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 agctgtccagcaaactctagagcgcccccagtggtgggactacaggtgtgcatcaccatg 569

                                                                       
Query: 370 cccgtctctatgtgaaggcccagaatcaaactcaggtgtcacagtggtgtggcaagcact 429
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 cctgtctctatgtgaaggcccagaatcaaactcaggtgtcacagtggtgtggcaagcact 629

                                                                       
Query: 430 ttcctggccaacctttttccctggtccctaaagaacataactcttgatctgctgtcctag 489
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 ttcctggccaaccttttcccctggtccctaaagaacataactcttgatctgctgtcctag 689

                                                                       
Query: 490 atacgcctgctattgcttgcctgtcctaagacacacccacccagtgatccacaatttgtt 549
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 atacgcctgctattgcttgcctgtcctaagacacacccacccagtgatccacaatttgtt 749

                          
Query: 550 ctttctctaaacaga 564
           |||||||||||||||
Sbjct: 750 ctttctctaaacaga 764


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 564
Length of database: 964
Length adjustment: 10
Effective length of query: 554
Effective length of database: 954
Effective search space:   528516
Effective search space used:   528516
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)