Query= MSMg01no449_p22.b1 MSMg01no449_p22.b1 CHROMAT_FILE:
MSMg01no449_p22.b1 PHD_FILE: MSMg01no449_p22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:19:46 2005
(443 letters)
>mm_chr2_135796656_135797498
Length = 843
Score = 772 bits (399), Expect = 0.0
Identities = 431/443 (97%), Gaps = 6/443 (1%)
Strand = Plus / Plus
Query: 4 ggaattctctgttgttc--tacggtaatgctgtctaggagttctgtgtggtggcttgcct 61
|||||||||||||| | | ||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctctgttggccagt--ggtaatgctgtctaggagttctgtgtggtggcttgcct 261
Query: 62 agtgagctaccttaatctccatcatg-aaaattaaggtgaggtaacaggttttcaaacaa 120
|||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 262 agtgagctaccttaatctccatcatggaaaat-aaggtgaggtaacaggttttcaaacaa 320
Query: 121 ctctaacatctgaacactctctacctgtgcacatctgttagttatctgccagagtgcctg 180
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctctaatatctgaacactctctacctgtgcacatctgttagttatctgccagagtgcctg 380
Query: 181 tacatagcaaaactccttccgtctgagtctctctcacccatacccgtggagtaagcacta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tacatagcaaaactccttccgtctgagtctctctcacccatacccgtggagtaagcacta 440
Query: 241 cattgccctgtgctgtggactgtgaagggcactcaagttatatagaaaggaagaaaagac 300
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 441 cattgccctgtgctgtggactgtgaagggcactcaagttatatagaaaggaggaaaagac 500
Query: 301 ccacagctaagttaacaagtagtctttctacaaggaaaagaggcagacatttggccaaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ccacagctaagttaacaagtagtctttctacaaggaaaagaggcagacatttggccaaat 560
Query: 361 gtaaaaggactcaggaactaaacctttggtaaaaggagacagcttgtcagcgtaccactc 420
|| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 561 gtcaaaggactcaggaactaaacctttggtaaaaggagacagcttgtcagcataccactc 620
Query: 421 tcttccccttgttcaagcaaaga 443
|||||||||||||||||||||||
Sbjct: 621 tcttccccttgttcaagcaaaga 643
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 443
Length of database: 843
Length adjustment: 10
Effective length of query: 433
Effective length of database: 833
Effective search space: 360689
Effective search space used: 360689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no449_p22.g1 MSMg01no449_p22.g1 CHROMAT_FILE:
MSMg01no449_p22.g1 PHD_FILE: MSMg01no449_p22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:19:46 2005
(443 letters)
>mm_chr2_136013223_136014065
Length = 843
Score = 739 bits (382), Expect = 0.0
Identities = 419/443 (94%), Gaps = 18/443 (4%)
Strand = Plus / Minus
Query: 1 attctagtttcctacccttgaatcccacataggtacttcatgttacatttcccctaaaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 821 attctagtttcctacccttgaatcccacataggtacttcatgttacatttcccctaaaag 762
Query: 61 aagaatagctaaaatctgggtgtataattttcctttattttaattctatgattaatctgt 120
||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 761 aagaatagctaaaatatgggtgtataattttcctttattttaattccatgattaatctgt 702
Query: 121 aactacaaggggtatggttggcctcatccctctaacacatagcttttaaataaagtatat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 aactacaaggggtatggttggcctcatccctctaacacatagcttttaaataaagtat-- 644
Query: 181 ttcttctaccaatgacaggataagtcattaagcatacattatctggacacaggtatgtat 240
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 ----------------aggataagtcattaagcatacattatctggacacaggtatgtat 600
Query: 241 ttctaaaatactcttatacccattattacgtttgccaagttcttcatgatggatatgaga 300
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 ttctaaaatactcaaatacccattattacgtttgccaagttcttcatgatggatatgaga 540
Query: 301 ctaagaaaataaaattttcttaatgagggggtcaatgagaaattattgtctcctaagaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 ctaagaaaataaaattttcttaatgagggggtcaatgagaaattattgtctcctaagaag 480
Query: 361 tatattaaaggcacgtattttaaattttgtggncttatattttctatgtctttatggctg 420
|||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 479 tatattaaaggcacatattttaaattttgtggtcttatattttctatgtctttatggctg 420
Query: 421 aaagtttttctttttctttttta 443
|||||||||||||||||||||||
Sbjct: 419 aaagtttttctttttctttttta 397
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 443
Length of database: 843
Length adjustment: 10
Effective length of query: 433
Effective length of database: 833
Effective search space: 360689
Effective search space used: 360689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
