Query= MSMg01no450_e16.b1 MSMg01no450_e16.b1 CHROMAT_FILE:
MSMg01no450_e16.b1 PHD_FILE: MSMg01no450_e16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:20:09 2005
(559 letters)
>mm_chr2_113847516_113848474
Length = 959
Score = 1027 bits (531), Expect = 0.0
Identities = 552/559 (98%), Gaps = 1/559 (0%)
Strand = Plus / Plus
Query: 1 agtagtaggtgctcttaatccctgagcccactgggtttgttaattaaagttcaaaggggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtagtaggtgctcttaatccctgagcccactgggtttgttaattaaagttcaaaggggt 260
Query: 61 gctctacttgcactgcagtaagatttggttagaaaggtgtatttcttttctagtttctgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gctctacttgcactgcagtaagatttggttagaaaggtgtatttcttttctagtttctgt 320
Query: 121 gatcaagtagctgacaagaagcaagtccaggagagcatgtttacttctgctttcagttat 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gatcaagtagctgacaagaagcaagtccaggagagcatgtttacttctgctttcagttag 380
Query: 181 aggcaatacgctctattgtgctgaaagagaaagccatgccagcaggatccctgggctgga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aggcaatacgctctattgtgctgaaagagaaagccatgccagcaggatccctgggctgga 440
Query: 241 ccatctctttgttagctctactcaggaaacagaatgaatggaagaggatacttatctata 300
||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 441 ccatctctttgc-agctctactcaggaaacagaatgaatggaagatgatacttatctata 499
Query: 301 aaacaccaccccatcccaaattagtgaccactctatctcccaaagcttccacagctttcc 360
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 500 aaacaccaccccatcccaaattagtgaccactctatctcccaaaggttccacagctttcc 559
Query: 361 caaacagtatcatcacctggtcaagtcttcaagcatgtgactgactgtatatggggcaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 caaacagtatcatcacctggtcaagtcttcaagcatgtgactgactgtatatggggcaat 619
Query: 421 tttcattctgaccacaacagaaagtgagcaagaatagagtcaaggaaagagggggatact 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tttcattctgaccacaacagaaagtgagcaagaatagagtcaaggaaagagggggatact 679
Query: 481 gctattgcagatcgcagctggtcagactcagcgaatatcctcacgtagatacctgtcttc 540
|||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||
Sbjct: 680 gctattgcagatcgcagctgatcagactcagtgaatatcctcacgtagatacctgtcttc 739
Query: 541 cttcaaagattatgttcat 559
|||||||||||||||||||
Sbjct: 740 cttcaaagattatgttcat 758
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 559
Length of database: 959
Length adjustment: 10
Effective length of query: 549
Effective length of database: 949
Effective search space: 521001
Effective search space used: 521001
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no450_e16.g1 MSMg01no450_e16.g1 CHROMAT_FILE:
MSMg01no450_e16.g1 PHD_FILE: MSMg01no450_e16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:20:10 2005
(244 letters)
>mm_chr2_114025250_114025893
Length = 644
Score = 456 bits (236), Expect = e-133
Identities = 242/244 (99%)
Strand = Plus / Minus
Query: 1 gaattgcctgacaggaattaaatatatttctgaattctttgcagtctgctgggtttatga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 gaattgcctgacaggaattaaatatatttctgaattctttgcagtctgctgggtttatga 247
Query: 61 taattttaatcctcctaacccttaactctttgccaacaagtttgcatgttgttcgttttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 taattttaatcctcctaacccttaactctttgccaacaagtttgcatgttgttcgttttt 187
Query: 121 aggtttttgttgttgttgtttggtttttgttgctttgttttgtttttcaaagctgatata 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct: 186 aggtttttgttgttgttgtttggtttttgttgctttgttttgtttttcaaagctgagaga 127
Query: 181 aatagaaatacccataaccccaacaggtgtttgttgctgggttatatgatatattttata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 aatagaaatacccataaccccaacaggtgtttgttgctgggttatatgatatattttata 67
Query: 241 aatt 244
||||
Sbjct: 66 aatt 63
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
