Query= MSMg01no450_f09.b1 MSMg01no450_f09.b1 CHROMAT_FILE:
MSMg01no450_f09.b1 PHD_FILE: MSMg01no450_f09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:20:13 2005
(233 letters)
>mm_chr2_9493111_9493743
Length = 633
Score = 368 bits (190), Expect = e-106
Identities = 220/230 (95%)
Strand = Plus / Minus
Query: 4 ttgactgactggtacttattgcgcaccatgattttgtcccacaaatgattgttcatgtaa 63
|||||||||||| |||||||| ||||||||| ||||| ||||||||||||||||||||
Sbjct: 433 ttgactgactggcacttattgggcaccatgagcttgtcaaacaaatgattgttcatgtaa 374
Query: 64 gtatcatttaatctctccaaactgttcccgaagatgtcttatcagaggtttgaaactctt 123
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 373 gtatcatttaatctctccaaactgttcccgaggatgtcttatcagaggtttgaaactctt 314
Query: 124 taccagtgagaaaagaagcaacctgttcttgataaagttctgttgatgttagggtccttc 183
|||||| ||||||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 313 taccagagagaaaagaagcaacctgttcttgataaagttctgttgacgtcagggtccttc 254
Query: 184 cttatcccacaaatccaacaaagtctcctgagctctggaacaagtggcca 233
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 cttatcccacaaatccaacaaagtctcctgagctctggaacaagtggcca 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 233
Length of database: 633
Length adjustment: 9
Effective length of query: 224
Effective length of database: 624
Effective search space: 139776
Effective search space used: 139776
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no450_f09.g1 MSMg01no450_f09.g1 CHROMAT_FILE:
MSMg01no450_f09.g1 PHD_FILE: MSMg01no450_f09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:20:13 2005
(245 letters)
>mm_chr2_9278015_9278659
Length = 645
Score = 466 bits (241), Expect = e-136
Identities = 244/245 (99%)
Strand = Plus / Plus
Query: 1 cctgactctgatatttgctccatggtgttgtttccagatctgatagactctgagacccct 60
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 201 cctgactctgatatttgctccatagtgttgtttccagatctgatagactctgagacccct 260
Query: 61 ctgagtagtgctccaaaccaaaaaagccagaacctctggggaagaccctgagcagaggtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctgagtagtgctccaaaccaaaaaagccagaacctctggggaagaccctgagcagaggtg 320
Query: 121 tggcctgagcactctgtttttggaagctccagaggtacccttgtggtaaagcaagttttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tggcctgagcactctgtttttggaagctccagaggtacccttgtggtaaagcaagttttc 380
Query: 181 catatatggctaaagtttgagagttccaactcaatttgaacagattccatattgaataaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 catatatggctaaagtttgagagttccaactcaatttgaacagattccatattgaataaa 440
Query: 241 cagaa 245
|||||
Sbjct: 441 cagaa 445
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 645
Length adjustment: 9
Effective length of query: 236
Effective length of database: 636
Effective search space: 150096
Effective search space used: 150096
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
