Query= MSMg01no450_h12.b1 MSMg01no450_h12.b1 CHROMAT_FILE:
MSMg01no450_h12.b1 PHD_FILE: MSMg01no450_h12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:20:24 2005
(527 letters)
>mm_chr2_146474377_146475303
Length = 927
Score = 955 bits (494), Expect = 0.0
Identities = 522/538 (97%), Gaps = 13/538 (2%)
Strand = Plus / Minus
Query: 1 ctgtcatttcatctttcct----------aaggaaaaaaaaaaaccaaacttaaccttca 50
||||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct: 760 ctgtcatttcatctttcctaaaaaaaaaaaa--aaaaaaaaaaaccaaacttaaccttca 703
Query: 51 aaacagagtctataccacacaatgaacttgggaacacagcaatgttacctgttagagaat 110
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 702 aaacagagtctataccacacaatgaacttgggaacacagcaatgttacctgttagagagt 643
Query: 111 aggaagaacttcagtggcacacctgattgtccccctcactttacagttgagaaaattgag 170
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 aggaagaacttcagtggcacacctgattgtccccctcactttacagttgagaaaattgag 583
Query: 171 gagtgcagaagaggcagtgcctggatgacagagccactctgatatttgggctttctcaac 230
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 gagtgcagaagaggcagtgcctggatgacagagccactctgatatttgggctttctcaac 523
Query: 231 ctaagtcaaattcaaagattttacaaaaccagtagaataaccaatgggtgtgttgtttga 290
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 ctaagtcaaattcaaagaagttacaaaaccagtagaataaccaatgggtgtgttgtttga 463
Query: 291 agttaatgtttagagtggtatgcacatctatccatgcttgccctggttgggttttgtcca 350
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 agttaatgtttagagtggtatgcacatctatccatgcttgccctggttgggttttgtcca 403
Query: 351 tttgacacaaacacatatctgagaagagcaatttttttagcttattcac-ttacatccca 409
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 402 tttgacacaaacacatatctgagaagagcaatttttttagcttattcactttacatccca 343
Query: 410 ctcactgctcgccttctggtcgccccttcccacaatctttccccaccccctccccttctc 469
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 ctcactgctcgccttctggtcgccccttcccacaatctttccccaccccctccccttctc 283
Query: 470 ctctgagtagatgcccccaccccaggtatccctccactctggaacatcaagtctctgt 527
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 ctctgagtagatgcccccaccccaggtatccctccactctggaacatcaagtctctgt 225
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 527
Length of database: 927
Length adjustment: 10
Effective length of query: 517
Effective length of database: 917
Effective search space: 474089
Effective search space used: 474089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no450_h12.g1 MSMg01no450_h12.g1 CHROMAT_FILE:
MSMg01no450_h12.g1 PHD_FILE: MSMg01no450_h12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:20:24 2005
(419 letters)
>mm_chr2_146346980_146347798
Length = 819
Score = 779 bits (403), Expect = 0.0
Identities = 415/419 (99%)
Strand = Plus / Plus
Query: 1 ctgtcttggcttcctttgatgatgctcgatgtataagatgaaatcgctcctcgagttgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctgtcttggcttcctttgatgatgctcgatgtataagatgaaatcgctcctcgagttgtt 260
Query: 61 tcttgtgtgccgtgtccccatcgtctccctccccctgcgcccccacttccttccctcctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcttgtgtgccgtgtccccatcgtctccctccccctgcgcccccacttccttccctcctg 320
Query: 121 ttcttagtgacagaatgccaacaaagacagcatagattctgagaaatgtgacatgggtaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttcttagtgacagaatgccaacaaagacagcatagattctgagaaatgtgacatgggtaa 380
Query: 181 ataagcagaaattaagtcagcatcatagatatttctatcccagaagagccaacaggtaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ataagcagaaattaagtcagcatcatagatatttctatcccagaagagccaacaggtaaa 440
Query: 241 ctaagtgatttgggcatctgcccaaaactcagtcaactgggcattctcccttgacagtta 300
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctaagtgaactgggcatctgcccaaaactcagtcaactgggcattctcccttgacagtta 500
Query: 301 aaggttgagatgagaggggtggtttggggtcctttgcatttgtgggatctgctacttgct 360
|||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct: 501 aaggttgagatgagaggggtggtttggggtcctttgcatttgtgggatctgcaacatgct 560
Query: 361 gattcctgtgttcttgttctgtgacctgtccaggcttcctggaatttcctctatttctg 419
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gattcctgtgttcttgttctgtgacctgtccaggcttcctggaatttcctctatttctg 619
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 419
Length of database: 819
Length adjustment: 9
Effective length of query: 410
Effective length of database: 810
Effective search space: 332100
Effective search space used: 332100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
