Query= MSMg01no451_l23.b1 MSMg01no451_l23.b1 CHROMAT_FILE:
MSMg01no451_l23.b1 PHD_FILE: MSMg01no451_l23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:22:06 2005
(654 letters)
>mm_chr2_114921495_114922549
Length = 1055
Score = 1236 bits (639), Expect = 0.0
Identities = 648/651 (99%), Gaps = 1/651 (0%)
Strand = Plus / Plus
Query: 5 gaattctttctgcttgctacacatttctatcttttaagttataacatgattaatggttcc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctttctgcttgctacacatttctatcttttaagttataacatgattaatggttcc 264
Query: 65 catacttcctgctacagaaagaattccacaagtcctttgtatttcgcacccacattttca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 catacttcctgctacagaaagaattccacaagtcctttgtatttcgcacccacattttca 324
Query: 125 gcatctcaaaatgcactgtgtcattttatatatgttactgatccgtatgcattcacataa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gcatctcaaaatgcactgtgtcattttatatatgttactgatccgtatgcattcacataa 384
Query: 185 tggtgcttgtatgcttatgcgctcgcctatttatatgccttttatacatcatgccaaata 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tggtgcttgtatgcttatgcgctcgcctatttatatgccttttatacatcatgccaaata 444
Query: 245 aagccatcttgtaataatatgactggctaaaggtgtgagcaagaattcatggaccatgcc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aagccatcttgtaataatatgactggctaaaggtgtgagcaagaattcatggaccatgcc 504
Query: 305 taaagatcccgtggtcttcaaagcatggagaattaaatagttaaattcttaaaattatga 364
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 505 taaagatcccgtggtcttcaaagcatggagaattaaatagttaaattcttaatattatga 564
Query: 365 gagaaagagaacaagggagaagacataagagagaagacaaagcattaaaagcaagaacaa 424
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 565 gagaaagagaacaagggagaagacataagagagaagactaagcattaaaagcaagaacaa 624
Query: 425 tatgtgttttaataacagtaaaacaatatggatttcaaatatccaaagactatggtttga 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tatgtgttttaataacagtaaaacaatatggatttcaaatatccaaagactatggtttga 684
Query: 485 aatattctattgaattcatgtaaggatataagaagtagattattttaattctcattt-aa 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 685 aatattctattgaattcatgtaaggatataagaagtagattattttaattctcattttaa 744
Query: 544 acatagagcaatttgtacctattagtgtaaaaatgattttgtgtgggtctccataatgag 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 acatagagcaatttgtacctattagtgtaaaaatgattttgtgtgggtctccataatgag 804
Query: 604 caaagagagaattggggcatatctgaatgaactaattcaaacctactggca 654
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 caaagagagaattggggcatatctgaatgaactaattcaaacctactggca 855
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 654
Length of database: 1055
Length adjustment: 10
Effective length of query: 644
Effective length of database: 1045
Effective search space: 672980
Effective search space used: 672980
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no451_l23.g1 MSMg01no451_l23.g1 CHROMAT_FILE:
MSMg01no451_l23.g1 PHD_FILE: MSMg01no451_l23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:22:07 2005
(642 letters)
>mm_chr2_115062191_115063232
Length = 1042
Score = 700 bits (362), Expect = 0.0
Identities = 380/386 (98%)
Strand = Plus / Minus
Query: 1 tgtgaattaagtaggaagtctatcttgttaccatattttgagcctactaacttatgttac 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 386 tgtgaattaagtaggaagtctatcttgttaccatattttgagcctactaaattatgttac 327
Query: 61 cttgtagcatatgtacttctgcatatttcaaatttctaagcaataaaaaaggactctaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 cttgtagcatatgtacttctgcatatttcaaatttctaagcaataaaaaaggactctaca 267
Query: 121 gagatggcatttattaaaacgatattggaacatactaatctggcttatttacaaatgttt 180
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 266 gagatggcatttattaaaacgatattggaacatactaatctgacttatttacaaatgttt 207
Query: 181 taggttggactagagggatggatcagtgagtaagatgcttgcctcacatgtctgaggacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 taggttggactagagggatggatcagtgagtaagatgcttgcctcacatgtctgaggacc 147
Query: 241 acaattcaagtcttcagtacccaggaaaatgccaggaaggcacggcagctcactcctaat 300
|||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||
Sbjct: 146 acaattcaagtcttcagtacccaggaaaatgccaggaaggcattgcagttcactcctaat 87
Query: 301 cccagtgtttggaaggtagacacaagggctcctctgaggagcctggatagctagagtagc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86 cccagtgtttggaaggtagacacaagggctcctctgaggagcctggatagctagagtagc 27
Query: 361 tgaataaattgtcctggattcaagta 386
||||||||||||||||| ||||||||
Sbjct: 26 tgaataaattgtcctgggttcaagta 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 642
Length of database: 1042
Length adjustment: 10
Effective length of query: 632
Effective length of database: 1032
Effective search space: 652224
Effective search space used: 652224
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
