CCTTCCTCTATCTATAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXCGCGGAATTCTATTTATGATAGAGCTCCTGAGGGTCACTGTTTAT
TCCTCTGGGCTGGGAATCCCCATATTGTAAAGGACTTGGATTTTCTATGG
GAAACTCATTATACTAGCAAGTCCAGAGCTAGAACCCCAGTGTAAAATTC
ATGTCTCCTTCTAACATCCTTACTTAAAGAATAAGTAAAACAGATGCCTC
AAAGTCTTCATAGAGCCTTTACTTCATCTTAACTTAAAGCCAGAATCTTT
AATGAATGATCCATTTTTAAAAAGGAATGGCATATTAGCAATTCTAAGAA
TAAACAGATTCATAAGAGAAAATTAACATTTCAAGAAACAGCTAGCACAG
AAATCAAATTAGAACTCCAGAGGCTGAGAGTTCATTTGATAATTTTAAAG
TCAATTCACTATGATTACTGCTCAAATAATATTCCATTTATGACTATTAA
CCTATTTTAAAAAATATTCATAATATATGATATAGGTTTGGGGGTTTTAA
AAGAGAAAGAATATGATGTTCAGCGGGTAGAGAGGGTGTTTGGATCATGG
AGAAGCTATGAGACAGAGATGAATATGATCAAAACATAGTATATAAAAGT
TTTATATTCCTACAGGAAAAGAACTAATAGCTATTCTCAGGGCTTTACTC
CTTGGTACTACAGAAAGCATGCA

ATAATTTAACTATGCTGTGGTAGGCCTGGCGGCCGCCTCCTCTCAAATGG
AGGTGACACTATATATTTTCCGCGGAATTCCTGATCTTTCCAAGTGTTTT
ATCGTGAATGGGTGTTGGATTTTGTCAAATGCTTTCTCTCATCTAAGGAG
ATGATCATGTGGTTTTTGACTTTGAGTTTGTTTATATAATGGATTACGTT
GATGGATTTTCGTATATTGAACCATCCCTGCATGCCTGGAATAAAACCTA
CTTTGTCAGGGAAGATGATTGTTTTGATGTGTTCTTGGATATTATTGAGA
GTATTTTTGCATTGATATTCATGAGGGAAATTGGTCTGAGGTTTTCTATC
TTTGTTGGATCTTTCTGTGGTTTAGGTATCAGAGTAATAGTGGCTTCATA
GAATGAGTTGGGTAGAGTATCTTCTATTTCTACTTTGTGGAACAGTTTGT
GCAGAACTGGAATTAGATCTTCTTTGAAGATCTGATAGAACTCTGCACTA
AACCCATCTGTTCCTGGGCTTTTTTTGGTTGGGAGACCACTAATGACTGC
TTCTATTTCTTTAGGGGATATGGGACTGTTTAGATCGTTAACTTGATCCT
TGTTTAAATTTGTTACCTGGTATCTGTCTAGAAATTTGTCCATTTCCTCC
AGATTTTCCAGTTTTGTTGAGTATAGCCTTTTGTAGAAGGATCTGATGGT
GTTTTGGATTTT

Query= MSMg01no451_p08.b1 MSMg01no451_p08.b1 CHROMAT_FILE:
MSMg01no451_p08.b1 PHD_FILE: MSMg01no451_p08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:22:23 2005
         (668 letters)



>mm_chr2_15595638_15596705
          Length = 1068

 Score = 1255 bits (649), Expect = 0.0
 Identities = 661/665 (99%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattctatttatgatagagctcctgagggtcactgtttattcctctgggctgggaatc 63
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 868 ggaattctatttatgatagagctcctgagggtcactgttttttcctctgggctgggaatc 809

                                                                       
Query: 64  cccatattgtaaaggacttggattttctatgggaaactcattatactagcaagtccagag 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 808 cccatattgtaaaggacttggattttctatgggaaactcattatactagcaagtccagag 749

                                                                       
Query: 124 ctagaaccccagtgtaaaattcatgtctccttctaacatccttacttaaagaataagtaa 183
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 748 ctagaaccccagtgtaaaattcatgtctccttctaacatccttactgaaagaataagtaa 689

                                                                       
Query: 184 aacagatgcctcaaagtcttcatagagcctttacttcatcttaacttaaagccagaatct 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 aacagatgcctcaaagtcttcatagagcctttacttcatcttaacttaaagccagaatct 629

                                                                       
Query: 244 ttaatgaatgatccatttttaaaaaggaatggcatattagcaattctaagaataaacaga 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 ttaatgaatgatccatttttaaaaaggaatggcatattagcaattctaagaataaacaga 569

                                                                       
Query: 304 ttcataagagaaaattaacatttcaagaaacagctagcacagaaatcaaattagaactcc 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 ttcataagagaaaattaacatttcaagaaacagctagcacagaaatcaaattagaactcc 509

                                                                       
Query: 364 agaggctgagagttcatttgataattttaaagtcaattcactatgattactgctcaaata 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 agaggctgagagttcatttgataattttaaagtcaattcactatgattactgctcaaata 449

                                                                       
Query: 424 atattccatttatgactattaacctattttaaaaaatattcataatatatgatataggtt 483
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 atattccatttatgtctattaacctattttaaaaaatattcataatatatgatataggtt 389

                                                                       
Query: 484 tgggggttttaaaagagaaagaatatgatgttcagcgggtagagagggtgtttggatcat 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 tgggggttttaaaagagaaagaatatgatgttcagcgggtagagagggtgtttggatcat 329

                                                                       
Query: 544 ggagaagctatgagacagagatgaatatgatcaaaacatagtatataaaagttttatatt 603
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 ggagaagctatgagacagagatgaatatgatcaaaacatagtatataaaagttttatatt 269

                                                                       
Query: 604 cctacaggaaaagaactaatagctattctcagggctttactccttggtactacagaaagc 663
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 268 cctacaggaaaagaactaatagctattctcaggactttactccttggtactacagaaagc 209

                
Query: 664 atgca 668
           |||||
Sbjct: 208 atgca 204


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 668
Length of database: 1068
Length adjustment: 10
Effective length of query: 658
Effective length of database: 1058
Effective search space:   696164
Effective search space used:   696164
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)