NCATCATATTGCGGCTTAGATCATATTCGAGAGGACCGCGGAATCTCTGG
TGAATTTTAGGTCACTTATATATACTATCATATATCTGCAAAAAGTGCTA
TTTTGACTTCTTCCCTTTTCAANTTTGTATCCCCTTGATCTCCTTTTGTG
TCTATTGCTCTGGCTAGGACTTCAGTACAAGTTGGAAAAGTAAGGAAAAA
AGGGGAAAAGCCTTGGCCAAACCCCCTGAAATTTTAGGGGGGAAAATTGT
TTTCCAATTTTTTCCCCCTTTTTTTTTTTTTTGGGGGGGGGGTNNCCAAA
TTTAGTAGGTTTTTGCGGGGAAAAAAAATATTTATTTTTTNTTAAAAAAA
AACAAAAATTTAATATTTTTTTATTTATTATATGGGCCCGCCCCCGGCNN
TNAGTTTCCCTCCCTGTATTTTTTTTTTCCCACAAAATATTTTTTTTTTT
TTTTTTTGTATTGGGTGTGTTTTGTTTTTGGGCGTTCCCCTAATGATATN
NTAAGTACAAAAATGTTGTTCTAGTATTATCCTTGTCCCACNATATGAGA
TATAACNTATGATG

CTCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXCCTCAATGGCACCAAAATGAGTA
GTTAGCTTTGTTGGTAGATATTTTACTCACTACAGACTCTTGCTTGAGTT
TTATAGATGCACAATTCTTAGGCAGATGAGATTGATACAGTCTTAGTAAT
GACTTAGTCATGTTAATAGATGTCTGGATTTCACTGCTTTAAAAATTTTT
AGCCAACATCACAATGTCTCTCAACTTTTTGTTAGTGGCATTAGTTATTT
TATTTGGATAAATCACCAAGTAGACACTGCAAAGTAAAAAGTCAAATTAG
TTTAGTGCTTTATAAGAGATTTACTTGGTGCTCTTCAAATGGTATGTTTT
AACATTTGGTAAATCACATGTGTCTCTTTCTCAACTACATAGGTATATGG
CAATCAGTAATTTTTACCTCATTCTTTTATCATTTCACAATGCTTAGAAT
TGTTTGCTTGGACTTTTAAAAAATTGTTTCTCCACCTAAGGAATGAATGT
CTGTGAAGCTCTCTGAATGAAACTGAGTATTAATTTCCTATGTTCTGCTT
AGTCATTTCCTAGAGAAAATTTAAATATGGACCTGAGGGAGTTCACACCT
CTCTTTAGGGATGCTACAACTATGATTCTGTTGTAGGTTACCTACCATAT
AATGTAATAGTTGATTTTATTTAGATTCCATGGAAATTCCAAGATACCAC
TCCTT

Query= MSMg01no452_b02.g1 MSMg01no452_b02.g1 CHROMAT_FILE:
MSMg01no452_b02.g1 PHD_FILE: MSMg01no452_b02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:22:31 2005
         (662 letters)



>mm_chr2_39202249_39203311
          Length = 1063

 Score = 1158 bits (599), Expect = 0.0
 Identities = 647/663 (97%), Gaps = 1/663 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   cctcaatggcaccaaaatgagtagttagctttgttggtagatattttactcactacagac 60
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cctccatggcaccaaaatgagtagttagctttgttggtagatattttactcactacagac 260

                                                                       
Query: 61  tcttgcttgagttttatagatgcacaattcttaggcagatgagattgatacagtcttagt 120
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 261 tcttgcttgagttttatagatgcataattcttaggcagatgagattgatacagtcttagt 320

                                                                       
Query: 121 aatgacttagtcatgttaatagatgtctggatttcactgctttaaaaatttttagccaac 180
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 321 aatgacttagtcatgttaatagatgtctggatttcactgccttaaaaatttttagccaac 380

                                                                       
Query: 181 atcacaatgtctctcaactttttgttagt-ggcattagttattttatttggataaatcac 239
           ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||
Sbjct: 381 atcacaatgtctctcaactttttgttatttggcattagttattttatttggataaatcac 440

                                                                       
Query: 240 caagtagacactgcaaagtaaaaagtcaaattagtttagtgctttataagagatttactt 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caagtagacactgcaaagtaaaaagtcaaattagtttagtgctttataagagatttactt 500

                                                                       
Query: 300 ggtgctcttcaaatggtatgttttaacatttggtaaatcacatgtgtctctttctcaact 359
           ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 501 ggtgctcttcaaatgctatgttttaatatttggtaaatcacatgtgtctctttctcaact 560

                                                                       
Query: 360 acataggtatatggcaatcagtaatttttacctcattcttttatcatttcacaatgctta 419
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 561 acataggtatatggcaatcagtaatttttatctcattcttttatcatttcacaatgctta 620

                                                                       
Query: 420 gaattgtttgcttggacttttaaaaaattgtttctccacctaaggaatgaatgtctgtga 479
           |||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||
Sbjct: 621 gaattgtttgcttggacttttagaaaattgtttctccacctaagcaatgaatgtctgtga 680

                                                                       
Query: 480 agctctctgaatgaaactgagtattaatttcctatgttctgcttagtcatttcctagaga 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 agctctctgaatgaaactgagtattaatttcctatgttctgcttagtcatttcctagaga 740

                                                                       
Query: 540 aaatttaaatatggacctgagggagttcacacctctctttagggatgctacaactatgat 599
           |||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct: 741 aaatttaaatatggacctgagggagttcacacctctctttagggatgctatagctatgat 800

                                                                       
Query: 600 tctgttgtaggttacctaccatataatgtaatagttgattttatttagattccatggaaa 659
           |||||||||||||||||| ||||||||||| |||||||||||||||||||||||  ||||
Sbjct: 801 tctgttgtaggttacctatcatataatgtagtagttgattttatttagattccacagaaa 860

              
Query: 660 ttc 662
           |||
Sbjct: 861 ttc 863


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 662
Length of database: 1063
Length adjustment: 10
Effective length of query: 652
Effective length of database: 1053
Effective search space:   686556
Effective search space used:   686556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)