Query= MSMg01no452_e20.b1 MSMg01no452_e20.b1 CHROMAT_FILE:
MSMg01no452_e20.b1 PHD_FILE: MSMg01no452_e20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:22:49 2005
(640 letters)
>mm_chr2_146215088_146216128
Length = 1041
Score = 1118 bits (578), Expect = 0.0
Identities = 584/586 (99%), Gaps = 1/586 (0%)
Strand = Plus / Minus
Query: 5 gaattcac-atacgtttgtttcagagtatgagacatttcacttcagcattgcctgtgtgt 63
|||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 gaattcacaagacgtttgtttcagagtatgagacatttcacttcagcattgcctgtgtgt 527
Query: 64 tggaggatatgcttgggctttggactgctaacacagtccctctgtcctatggcctttgcc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 tggaggatatgcttgggctttggactgctaacacagtccctctgtcctatggcctttgcc 467
Query: 124 cacacaggttttgataagctacccacactgcaacagaatctacctgctcactctgtccag 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 cacacaggttttgataagctacccacactgcaacagaatctacctgctcactctgtccag 407
Query: 184 gcatgaaccacatgccagtgcatgcttaatatatttaactcactagagaaatgcaaatga 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 gcatgaaccacatgccagtgcatgcttaatatatttaactcactagagaaatgcaaatga 347
Query: 244 aaatatcacattataccaccctttactgaggggaacaagtggcacttttgtactccactc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 aaatatcacattataccaccctttactgaggggaacaagtggcacttttgtactccactc 287
Query: 304 agggtgatgctgcctatgctggttcatggaaatgccacttcagaaaatggactcggtctc 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 agggtgatgctgcctatgctggttcatggaaatgccacttcagaaaatggactcggtctc 227
Query: 364 ttttcttcactcgaatatgtactgagcatgcacttaggatacacaggatctcactccagt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 ttttcttcactcgaatatgtactgagcatgcacttaggatacacaggatctcactccagt 167
Query: 424 tatttaccaaagagaaatgtcagtatatgttcacacaaatacatgcatgtgaatggtcct 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 166 tatttaccaaagagaaatgtcagtatatgttcacacaaatacatgcatgtgaatggtcct 107
Query: 484 ggcagttttattcctagttactcaaaataggaactaatttaactaatcttcatcagaaga 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106 ggcagttttattcctagttactcaaaataggaactaatttaactaatcttcatcagaaga 47
Query: 544 aaagatgaactttgatatatctcaaaatggaatgttaatcggcaat 589
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46 aaagatgaactttgatatatctcaaaatggaatgttaatcggcaat 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 640
Length of database: 1041
Length adjustment: 10
Effective length of query: 630
Effective length of database: 1031
Effective search space: 649530
Effective search space used: 649530
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no452_e20.g1 MSMg01no452_e20.g1 CHROMAT_FILE:
MSMg01no452_e20.g1 PHD_FILE: MSMg01no452_e20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:22:49 2005
(662 letters)
>mm_chr2_146066112_146067173
Length = 1062
Score = 1280 bits (662), Expect = 0.0
Identities = 662/662 (100%)
Strand = Plus / Plus
Query: 1 aggtcaattcaggctctgctttgcacttgacatcccaggacaccaacatgttctgtaagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aggtcaattcaggctctgctttgcacttgacatcccaggacaccaacatgttctgtaagt 260
Query: 61 aatgggtactcagcaagcattggctacagaaacaagtgaacaaacttgtttacaaacttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aatgggtactcagcaagcattggctacagaaacaagtgaacaaacttgtttacaaacttg 320
Query: 121 gttattcagcattctgagaattcactactgtctggaccatggagtggcccaggatgccct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gttattcagcattctgagaattcactactgtctggaccatggagtggcccaggatgccct 380
Query: 181 cagagaccataggataggatgcagtgtgattgctgaagtcccgagggaggaaatatcaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cagagaccataggataggatgcagtgtgattgctgaagtcccgagggaggaaatatcaat 440
Query: 241 acctgacttcagccacaatagaagtactctaaattacatgttgcaaaatatgtaattttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acctgacttcagccacaatagaagtactctaaattacatgttgcaaaatatgtaattttt 500
Query: 301 acaaagtcctcaaatactctttactccttagggcagagactagctagtacaggaggctgc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 acaaagtcctcaaatactctttactccttagggcagagactagctagtacaggaggctgc 560
Query: 361 ctagaaaagacagagcagggggtaaaggtccttgtgaggctacataccagttgtagaaac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctagaaaagacagagcagggggtaaaggtccttgtgaggctacataccagttgtagaaac 620
Query: 421 agaccatcctggcctgctcatgccttatttaaagactggatgagtcttagtaggtaagac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agaccatcctggcctgctcatgccttatttaaagactggatgagtcttagtaggtaagac 680
Query: 481 gacggatggaggacagggtgttttgaggaaccacatatgcagagaaggttgcgaccatca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gacggatggaggacagggtgttttgaggaaccacatatgcagagaaggttgcgaccatca 740
Query: 541 gaggctgcaggtcctctggcagctggatgttagcattccatactatgaaccaggaaggaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gaggctgcaggtcctctggcagctggatgttagcattccatactatgaaccaggaaggaa 800
Query: 601 ttctacatgaacgtgtaagttctctgaatgggatcaactaccatattggacacttctgtc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 ttctacatgaacgtgtaagttctctgaatgggatcaactaccatattggacacttctgtc 860
Query: 661 gg 662
||
Sbjct: 861 gg 862
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 662
Length of database: 1062
Length adjustment: 10
Effective length of query: 652
Effective length of database: 1052
Effective search space: 685904
Effective search space used: 685904
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
