Query= MSMg01no452_l21.b1 MSMg01no452_l21.b1 CHROMAT_FILE:
MSMg01no452_l21.b1 PHD_FILE: MSMg01no452_l21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:23:23 2005
(676 letters)
>mm_chr2_148346255_148347334
Length = 1080
Score = 1243 bits (643), Expect = 0.0
Identities = 667/677 (98%), Gaps = 5/677 (0%)
Strand = Plus / Plus
Query: 5 gaattccaccctggttccatcctgcaggtagcaagcttaagaatgttcttcataaccaca 64
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccaccctggacccatcctgcaggtagcaagcttaagaatgttcttcataaccaca 264
Query: 65 ggggactagaggtgtttccaagtgagtccta----gatcagggaagcagaggcaggaata 120
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 265 ggggactagaggtgtttccaagtgagtcctaattagatcagggaagcagaggcaggaata 324
Query: 121 gttccagaatgtacccaagggccagagctaacctgagtatgaccagagtcactgttgatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gttccagaatgtacccaagggccagagctaacctgagtatgaccagagtcactgttgatg 384
Query: 181 tctagtccagagatcttttctttctgccaagccacttcctcttttcaactttactttcac 240
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tctagtccagatatcttttctttctgccaagccacttcctcttttcaactttactttcac 444
Query: 241 taggtttaaaaaaatattagctgtccccaagcagccacagacaaatttgtgtcacattcc 300
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 taggtttaaaaaaataatagctgtccccaagcagccacagacaaatttgtgtcacattcc 504
Query: 301 cagcttctgatttggaaacaggagggaaagaaggcaaagaagtacgtgaggtactttaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 cagcttctgatttggaaacaggagggaaagaaggcaaagaagtacgtgaggtactttaca 564
Query: 361 aagatttctttaaaagtaaaatgaagctggggagatgctgctgtcagtaaaatggctact 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 aagatttctttaaaagtaaaatgaagctggggagatgctgctgtcagtaaaatggctact 624
Query: 421 gtgcaatcaccaggacctgatgtcagatccccagcacacaagtgaaaagccaggcatggg 480
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gtgtaatcaccaggacctgatgtcagatccccagcacacaagtgaaaagccaggcatggg 684
Query: 481 aacacacacctgtaatcccagcattggaaacagagggatccctggagctcactgactaca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 aacacacacctgtaatcccagcattggaaacagagggatccctggagctcactgactaca 744
Query: 541 gtctagccaaactggcaaactccagatttagtgagcaacccggcctctagtaataaggtg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 gtctagccaaactggcaaactccagatttagtgagcaacccggcctctagtaataaggtg 804
Query: 601 cagagagtggttgaagaaga-acccaacttccacctctgacctctctcgatatatacatg 659
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 805 cagagagtggttgaagaagacacccaacttccacctctgacctctctcgatatatacatg 864
Query: 660 tatatgtgcacataggc 676
|||||||||||||||||
Sbjct: 865 tatatgtgcacataggc 881
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 676
Length of database: 1080
Length adjustment: 10
Effective length of query: 666
Effective length of database: 1070
Effective search space: 712620
Effective search space used: 712620
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no452_l21.g1 MSMg01no452_l21.g1 CHROMAT_FILE:
MSMg01no452_l21.g1 PHD_FILE: MSMg01no452_l21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:23:24 2005
(616 letters)
>mm_chr2_148556686_148557700
Length = 1015
Score = 1152 bits (596), Expect = 0.0
Identities = 611/616 (99%), Gaps = 1/616 (0%)
Strand = Plus / Minus
Query: 1 aacctggagtttggcagcagctggtggctcctggggagcgcgaagtctgcgcccctgtat 60
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 815 aacctggagtttggcagcagctggtggctcgtggggagcgcgaagtctgcgcccctgtat 756
Query: 61 cctgggcacttgcccgctggccttggcccaagggccttgaaatcatatcctccttggtgt 120
|| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 755 cccgggcacttgcccgctggccttggctcaagggccttgaaatcatatcctccttggtgt 696
Query: 121 gtttttcatttgccagagtgacttttatccgtagttcaggcttcccgtttgatgaactgt 180
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 695 gtttttcatttgccagagtgacttgtatccgtagttcaggcttcccgtttgatgaactgt 636
Query: 181 atgtaacattgctcctttttaaagtcagagtatcctttgggaatcccgtgattttgtata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 635 atgtaacattgctcctttttaaagtcagagtatcctttgggaatcccgtgattttgt-ta 577
Query: 241 attcttacatatcttggtagggaagggtttggtttacattctgagctttcaaaaagcaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 attcttacatatcttggtagggaagggtttggtttacattctgagctttcaaaaagcaaa 517
Query: 301 acctgccctgagagcttgtggaagaattctgggctgttgattatgcgaatgattcagctg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 acctgccctgagagcttgtggaagaattctgggctgttgattatgcgaatgattcagctg 457
Query: 361 tttatgacagcggtagaaattacgtgtgcctcttcttttttttctcccatttgaaagtga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 tttatgacagcggtagaaattacgtgtgcctcttcttttttttctcccatttgaaagtga 397
Query: 421 aagatctgtaccaagaacagattttaattatcgagagggactagaggtacatactaaact 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 aagatctgtaccaagaacagattttaattatcgagagggactagaggtacatactaaact 337
Query: 481 gctgcattgtgagacgcagtttctgtaaaaattcagtatagacacttaagtgctgaaaat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 gctgcattgtgagacgcagtttctgtaaaaattcagtatagacacttaagtgctgaaaat 277
Query: 541 gtacccagtgaactttgacttttatttttacttcattcatctgactactaattacattaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 gtacccagtgaactttgacttttatttttacttcattcatctgactactaattacattaa 217
Query: 601 ttattatataatagtt 616
||||||||||||||||
Sbjct: 216 ttattatataatagtt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 616
Length of database: 1015
Length adjustment: 10
Effective length of query: 606
Effective length of database: 1005
Effective search space: 609030
Effective search space used: 609030
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
